Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0000290 (ilvI) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0000290 showshow history
Names
ilvI JW0076 ECK0079 b0077
Product
acetolactate synthase III large subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 85630 87354 1725 575
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012846 (IPR012846 Acetolactate synthase, large subunit, biosynthetic) Apr 2008
Automated Process Approved IPR011766 (IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding) Apr 2008
Automated Process Approved IPR012000 (IPR012000 Thiamine pyrophosphate enzyme, central domain) Apr 2008
Automated Process Approved IPR000399 (IPR000399 TPP-binding enzyme, conserved site) Apr 2008
Automated Process Approved IPR012001 (IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain) Apr 2008
Automated Process Approved IPR029061 (IPR029061 Thiamin diphosphate-binding fold) Jul 2018
Automated Process Approved IPR029035 (IPR029035 DHS-like NAD/FAD-binding domain superfamily) Jul 2018
Automated Process Approved PF02776 (PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain) Jul 2018
Automated Process Approved PF00205 (PF00205 Thiamine pyrophosphate enzyme, central domain) Jul 2018
Automated Process Approved PF02775 (PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009082 branched-chain amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011766
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000399
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0050660 flavin adenine dinucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0030976 thiamine pyrophosphate binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003984 acetolactate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ilvI Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW0076 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK0079 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0077 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product acetolactate synthase III large subunit Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name acetolactate synthase III, valine sensitive, large subunit Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name acetolactate synthase III, valine-sensitive, large subunit Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Automated Process Approved protein family IPR012000 Thiamine pyrophosphate enzyme, central domain Protein Sequence Similarity - InterPro Domain: IPR012000
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Protein Sequence Similarity - InterPro Domain: IPR011766
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR012846 Acetolactate synthase, large subunit, biosynthetic Protein Sequence Similarity - InterPro Domain: IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR000399 TPP-binding enzyme, conserved site Protein Sequence Similarity - InterPro Domain: IPR000399
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Protein Sequence Similarity - PFAM Model Name: PF02776
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Protein Sequence Similarity - InterPro Domain: IPR012001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00205 Thiamine pyrophosphate enzyme, central domain Protein Sequence Similarity - PFAM Model Name: PF00205
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR029035 DHS-like NAD/FAD-binding domain superfamily Protein Sequence Similarity - InterPro Domain: IPR029035
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Protein Sequence Similarity - PFAM Model Name: PF02775
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR029061 Thiamin diphosphate-binding fold Protein Sequence Similarity - InterPro Domain: IPR029061
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 2.2.1.6 Published Annotation - Swiss-Prot Accession Number: P00893 Feb 2006
Person Uncurated MultiFun 1.5.1.18 (metabolism; building block biosynthesis; amino acids; isoleucine/valine) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P00893 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:87081685 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P00893 Published Annotation - Swiss-Prot Accession Number: P00893 Jan 2005
Automated Process Approved db xref EcoGene:EG10500 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948793 Published Annotation - Entrez Gene Database ID: 948793
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0000290 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Amino acid biosynthesis: Isoleucine, Valine Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note acetolactate synthase III, valine sensitive, large subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73188.2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0009082 branched-chain amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003984 acetolactate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0030976 thiamine pyrophosphate binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0050660 flavin adenine dinucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012846
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011766
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000399
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001698 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000725 ilvI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001121 ilvI CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001580 ilvI CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001147 ilvI CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0003145 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0003759 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129496 ilvI CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0104934 ilvI CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104336 ilvI CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000743 ilvI CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003469 ilvB CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000933 ilvI CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0001346 ilvI CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0005088 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0018280 ilvI CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0003638 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001107 ilvB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0298136 ilvI CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003111 ilvI CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000783 ilvI CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000775 ilvI CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008711 ilvI CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000080 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006498 ilvI CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000074 ilvI CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004224 ilvI CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009665 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008068 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076158 ilvI CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000074 CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000123 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009493 ilvI CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009800 ilvI CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000087 ilvI CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0004530 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009326 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007835 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008517 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009519 ilvI CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0004926 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009494 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008647 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007647 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010710 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009590 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009193 ilvI CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009870 ilvI CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0023993 ilvI CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009482 ilvI CDS
Automated Process Approved Go view Escherichia coli HS ADR-0004765 ilvI CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000383 CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000080 ilvI CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000287 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000272 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000263 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000092 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174279 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000080 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000084 ilvI CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0129960 ilvI CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001506 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000086 ilvI CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000260 ilvI CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0004254 ilvI CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000083 ilvI CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003123 ilvI CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005091 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000036 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004553 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000055 ilvI CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004193 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000740 ilvI CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003571 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008416 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0004163 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0287693 ilvI CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0003875 ilvI CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064145 ilvI CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002208 ilvI CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002163 ilvI CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002199 ilvI CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0008803 CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0001003 ilvB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004313 ilvB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003034 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000136 ilvI CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004404 ilvB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000386 ilvI CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000372 ilvI CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006710 ilvB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004495 ilvB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007192 ilvB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004462 ilvB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004940 ilvB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008551 ilvB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004501 ilvB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005930 ilvB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000120 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000119 ilvI CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000151 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004800 ilvB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005998 ilvI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004226 ilvI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004369 ilvB CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0105542 ilvI CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0081831 ilvI CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000140 ilvI CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0090996 ilvI pseudogene
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004387 ilvB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007182 ilvB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004421 ilvB CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000146 ilvI CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0265860 ilvI CDS
Person Approved Go view Shigella boydii 227 ADV-0000071 ilvI CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007219 ilvI CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000118 ilvI CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071004 ilvI CDS
Person Approved Go view Shigella flexneri 301 ABT-0086436 ilvI CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000070 ilvI CDS
Person Approved Go view Shigella sonnei 046 ADD-0000091 ilvI CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0001743 ilvI CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002576 VC2483 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0001827 ilvI CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001560 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002023 ilvI CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000208 ilvI CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002619 ilvI CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001608 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243077 ilvI CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007047 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004247 ilvI CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005959 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002781 ilvI CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0117155 ilvI CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005168 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008588 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007125 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007735 ilvB1 CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033419 ilvI CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007946 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000510 ilvI CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003712 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007552 ilvB1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007416 ilvB1 CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000717 ilvI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000834 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004184 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0002363 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000128 ilvI CDS
Molecular Interactions to toptop
Author Approval Feature Name Technique Evidence Comment Annotated
Person Approved ABE-0000290 ilvI lambda repressor assay Doodle - bnumber: b0077 Oct 2003
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 80630 to 92354
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0000261leuCCDScomplement7946480864Upstream
ABE-0000265leuBCDScomplement8086781958Upstream
ABE-0000267leuACDScomplement8195883529Upstream
ABE-0000269leuLCDScomplement8362283708Upstream
ABE-0000280leuOCDSforward8436885312Upstream
ABE-0285808yabRCDScomplement8546785511Upstream
ABE-0000290ilvICDSforward8563087354Matches
ABE-0000294ilvHCDSforward8735787848Downstream
ABE-0000299craCDSforward8802889032Downstream
ABE-0000302mraZCDSforward8963490092Downstream
ABE-0000304rsmHCDSforward9009491035Downstream
ABE-0000306ftsLCDSforward9103291397Downstream
ABE-0000309ftsICDSforward9141393179Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.