Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0000320 (ftsW) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0000320 showshow history
Names
ftsW JW0087 ECK0090 b0089
Product
cell division membrane protein
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 98403 99647 1245 415
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000049
EnteroFam0000320: Trusted threshold=1107.9; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR001182 (IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA) Apr 2008
Automated Process Approved IPR013437 (IPR013437 Probable peptidoglycan glycosyltransferase FtsW) Apr 2008
Automated Process Approved PF01098 (PF01098 Cell cycle protein) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0007049 cell cycle GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0051301 cell division GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013437
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0009252 peptidoglycan biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013437
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ftsW Published Annotation - PubMed ID: 2676977
Reference: Escherichia coli K-12 		Feb 2007
Person Approved synonym ECK0090 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW0087 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0089 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product cell division membrane protein Published Annotation - PubMed ID: 15576787
Reference: Escherichia coli K-12 		Feb 2007
Person Approved alternate product name cell division; membrane protein involved in shape determination Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Automated Process Approved alternate product name lipid II flippase; integral membrane protein involved in stabilizing FstZ ring during cell division Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name essential cell division gene, stablilzes FtsZ ring, required for PBP2 expression Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0000320: Trusted threshold=1107.9; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000049
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Protein Sequence Similarity - InterPro Domain: IPR001182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR013437 Probable peptidoglycan glycosyltransferase FtsW Protein Sequence Similarity - InterPro Domain: IPR013437
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF01098 Cell cycle protein Protein Sequence Similarity - PFAM Model Name: PF01098
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.9.B.3 (transport; Transporters of Unknown Classification; Putative uncharacterized transport protein; The Putative Bacterial Murein Precursor Exporter (MPE) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 5.1 (cell processes; cell division) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10344 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946322 Published Annotation - Entrez Gene Database ID: 946322
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1786277 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0ABG4 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0000320 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0ABG4 Published Annotation - Swiss-Prot Accession Number: P0ABG4 Jan 2006
Person Approved function membrane; Cell division Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note cell division; membrane protein involved in shape determination; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73200.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0007049 cell cycle GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0009252 peptidoglycan biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013437
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0051301 cell division GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013437
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000049 ftsW CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001709 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000238 ftsW CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000295 ftsW CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000251 ftsW CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001008 ftsW CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0003157 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0003773 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129487 ftsW CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0104925 ftsW CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104327 ftsW CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000754 ftsW CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003456 ftsW CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000944 ftsW CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0001357 ftsW CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0005102 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0018262 ftsW CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0003626 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001119 ftsW CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0298181 ftsW CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003096 ftsW CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000794 ftsW CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000763 ftsW CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008699 ftsW CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000092 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006486 ftsW CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000084 ftsW CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004213 ftsW CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009652 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009068 ftsW CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008056 FtsW CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076171 ftsW CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000086 ftsW CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000135 ftsW CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009504 ftsW CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009788 ftsW CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000099 ftsW CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0004542 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002564 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009337 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007847 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008529 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009508 ftsW CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0004937 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009506 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008659 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007659 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010722 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009579 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009205 ftsW CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009882 ftsW CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024005 ftsW CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009939 ftsW CDS
Automated Process Approved Go view Escherichia coli HS ADR-0004777 ftsW CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000394 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000133 ftsW CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000091 ftsW CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000274 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000258 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000249 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000105 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174292 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000092 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000095 ftsW CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0129972 ftsW CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001519 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000099 ftsW CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000271 ftsW CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0004242 ftsW CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000094 ftsW CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003135 ftsW CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005105 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000047 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004564 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000066 ftsW CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004182 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000751 ftsW CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0003560 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008428 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0004174 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0287709 ftsW CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0003886 ftsW CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0064133 ftsW CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002194 ftsW CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0002156 ftsW CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003945 ftsW CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0008790 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0145157 ftsW CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0004483 ftsW CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004325 ftsW CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003021 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000147 ftsW CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004415 ftsW CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000430 ftsW CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000416 ftsW CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006698 ftsW CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004507 ftsW CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007180 ftsW CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004474 ftsW CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004952 ftsW CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008563 ftsW CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004512 ftsW CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005918 ftsW CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000131 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000130 ftsW CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000165 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004812 ftsW CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005987 ftsW CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004237 ftsW CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004381 ftsW CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0105566 ftsW CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0081842 ftsW CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000154 ftsW CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0091031 ftsW CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004375 ftsW CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007170 ftsW CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004433 ftsW CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000160 ftsW CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267868 ftsW CDS
Person Approved Go view Shigella boydii 227 ADV-0000083 ftsW CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005480 ftsW CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007230 ftsW CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000130 ftsW CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071019 ftsW CDS
Person Approved Go view Shigella flexneri 301 ABT-0086450 ftsW CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000085 ftsW CDS
Person Approved Go view Shigella sonnei 046 ADD-0000105 ftsW CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0001732 ftsW CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002495 VC2402 CDS
Person Uncurated Go view Wigglesworthia morsitans AEQ-0000365 ftsW CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0001844 ftsW CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001548 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002067 ftsW CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000196 ftsW CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002607 ftsW CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001620 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243034 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007034 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004233 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005974 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002767 ftsW CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0117206 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005150 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008574 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003444 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007110 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007719 ftsW CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033405 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007961 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000524 ftsW CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003697 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007539 ftsW CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007403 ftsW CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0000729 ftsW CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000847 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004171 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0002416 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000117 ftsW CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 93403 to 104647
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0000311murECDSforward9316694653Upstream
ABE-0000313murFCDSforward9465096008Upstream
ABE-0000316mraYCDSforward9600297084Upstream
ABE-0000318murDCDSforward9708798403Overlaps Upstream
ABE-0000320ftsWCDSforward9840399647Matches
ABE-0000322murGCDSforward99644100711Overlaps Downstream
ABE-0000324murCCDSforward100765102240Downstream
ABE-0000326ddlBCDSforward102233103153Downstream
ABE-0000329ftsQCDSforward103155103985Downstream
ABE-0000331ftsACDSforward103982105244Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.