Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0000430 (cueO) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0000430 showshow history
Names
cueO cuiD JW0119 ECK0122 yacK b0123
Product
multicopper oxidase (laccase)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 137083 138633 1551 517
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR008972 (IPR008972 Cupredoxin) Apr 2008
Automated Process Approved IPR011707 (IPR011707 Multicopper oxidase, type 3) Apr 2008
Automated Process Approved IPR011706 (IPR011706 Multicopper oxidase, type 2) Apr 2008
Automated Process Approved IPR002355 (IPR002355 Multicopper oxidase, copper-binding site) Apr 2008
Automated Process Approved IPR006311 (IPR006311 Twin-arginine translocation pathway, signal sequence) Apr 2008
Automated Process Approved IPR001117 (IPR001117 Multicopper oxidase, type 1) Jul 2018
Automated Process Approved PF00394 (PF00394 Multicopper oxidase) Jul 2018
Automated Process Approved PF07731 (PF07731 Multicopper oxidase) Jul 2018
Automated Process Approved PF07732 (PF07732 Multicopper oxidase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR001117, IPR011706
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011707
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005507 copper ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011707
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name cueO Experimental - PubMed ID: 11867755
Reference: Escherichia coli 		Aug 2002
Person Approved synonym yacK Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW0119 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK0122 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym cuiD Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved locus tag b0123 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product multicopper oxidase (laccase) Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Automated Process Approved protein family IPR002355 Multicopper oxidase, copper-binding site Protein Sequence Similarity - InterPro Domain: IPR002355
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011706 Multicopper oxidase, type 2 Protein Sequence Similarity - InterPro Domain: IPR011706
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR008972 Cupredoxin Protein Sequence Similarity - InterPro Domain: IPR008972
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006311 Twin-arginine translocation pathway, signal sequence Protein Sequence Similarity - InterPro Domain: IPR006311
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011707 Multicopper oxidase, type 3 Protein Sequence Similarity - InterPro Domain: IPR011707
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001117 Multicopper oxidase, type 1 Protein Sequence Similarity - InterPro Domain: IPR001117
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF07731 Multicopper oxidase Protein Sequence Similarity - PFAM Model Name: PF07731
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00394 Multicopper oxidase Protein Sequence Similarity - PFAM Model Name: PF00394
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF07732 Multicopper oxidase Protein Sequence Similarity - PFAM Model Name: PF07732
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 1.-.-.- Protein Sequence Similarity - InterPro Domain: IPR011707
Reference: Escherichia coli K-12 MG1655 		Dec 2008
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0000430 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1786314 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:947736 Published Annotation - Entrez Gene Database ID: 947736
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P36649 Published Annotation - Swiss-Prot Accession Number: P36649 Jan 2005
Automated Process Approved db xref EcoGene:EG12318 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P36649 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73234.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Periplasmic Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR001117, IPR011706
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011707
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005507 copper ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011707
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003381 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001913 cueO CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001844 cueO CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001855 cueO CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001967 cueO CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000793 cueO CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003426 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000987 cueO_1 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0001392 cueO CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007125 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0014506 cueO CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001840 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001161 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0298505 cueO CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003005 cueO CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000873 cueO CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000730 cueO CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008387 cueO CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000131 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006454 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000119 cueO CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004175 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009616 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007839 cueO CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006528 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076216 cueO CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000118 cueO CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000170 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009956 cueO CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006912 cueO CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000131 cueO CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0004575 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001370 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009372 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007879 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008562 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010567 cueO CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0004970 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009398 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008698 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007695 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009841 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010294 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009146 cueO CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009496 cueO CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024039 cueO CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007933 cueO CDS
Automated Process Approved Go view Escherichia coli HS ADR-0004809 cueO CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000431 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000165 cueO CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000123 cueO CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000239 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000223 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000360 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000150 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174330 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000124 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000134 cueO CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130006 cueO CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001552 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000137 cueO CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000306 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000132 cueO CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003170 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006976 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000086 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004605 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000107 cueO CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004141 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000791 cueO CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003520 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008481 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0004221 CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0003936 yacK CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0138682 cueO CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004380 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002970 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000191 cueO CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004461 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000580 cueO CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000565 cueO CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008347 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004558 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007128 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004517 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005004 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008616 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004557 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005874 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000173 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000172 cueO CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000211 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004856 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005941 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004281 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004425 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0105662 cueO CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0081884 cueO CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000201 cueO CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0091162 cueO CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004326 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007123 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004477 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0001711 CDS
Person Approved Go view Shigella boydii 227 ADV-0000119 cueO CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005514 cueO CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006000 cueO CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000034 cueO CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071055 cueO CDS
Person Approved Go view Shigella flexneri 301 ABT-0086482 cueO CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000117 yacK CDS
Person Approved Go view Shigella sonnei 046 ADD-0000139 cueO CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002243 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002205 yacK CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000157 yacK CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002892 cueO CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000860 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234825 cueO CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005127 cueO CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003488 cueO CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008203 cueO CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003948 cueO CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126812 cueO CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006388 cueO CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005877 cueO CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002688 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005864 cueO CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004216 cueO CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030414 cueO CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006619 cueO CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000833 cueO CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003530 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004903 cueO CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007367 cueO CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0000764 cueO CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000889 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004128 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0002560 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000080 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB23326mutantTn5 InsertionRequest the StrainABE-0000430cueOyacK::Tn5KAN-I-SceI at position 1164 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 132083 to 143633
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0000411acnBCDSforward131615134212Upstream
ABE-0000414yacLCDSforward134388134750Upstream
ABE-0000416speDCDScomplement134788135582Upstream
ABE-0000418speECDScomplement135598136464Upstream
ABE-0000423yacCCDScomplement136570136917Upstream
ABE-0000430cueOCDSforward137083138633Matches
ABE-0285329repeat_regionforward138699138796Downstream
ABE-0000433gcdCDScomplement138835141225Downstream
ABE-0000440hptCDSforward141431141967Downstream
ABE-0285330repeat_regionforward141978141998Downstream
ABE-0000442canCDScomplement142008142670Downstream
ABE-0000447yadGCDSforward142779143705Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.