Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0000542 (btuF) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0000542 showshow history
Names
btuF yadT JW0154 ECK0157 b0158
Product
periplasmic binding component of cobalamin (vitamin B-12) transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 177662 178462 801 267
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000097
EnteroFam0000542: Trusted threshold=722.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR002491 (IPR002491 ABC transporter periplasmic binding domain) Apr 2008
Automated Process Approved PF01497 (PF01497 Periplasmic binding protein) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006827 (DEPRECATED) high-affinity iron ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002491
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Approved GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002491
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005381 iron ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002491
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name btuF Published Sequence Analysis - PubMed ID: 11790740
Reference: Escherichia coli K-12 		Feb 2007
Person Approved synonym JW0154 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym yadT Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Approved synonym ECK0157 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0158 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product periplasmic binding component of cobalamin (vitamin B-12) transporter Experimental - PubMed ID: 11790740
Reference: Escherichia coli K-12 		Feb 2007
Person Approved alternate product name cyano-cobalamin transport protein (ABC superfamily, peri_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0000542: Trusted threshold=722.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000097
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family PF01497 Periplasmic binding protein Protein Sequence Similarity - PFAM Model Name: PF01497
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR002491 ABC transporter periplasmic binding domain Protein Sequence Similarity - InterPro Domain: IPR002491
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved MultiFun 7.2 (location of gene products; periplasmic space) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12334 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0000542 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P37028 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:947574 Published Annotation - Entrez Gene Database ID: 947574
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1786353 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P37028 Published Annotation - Swiss-Prot Accession Number: P37028 Jan 2005
Automated Process Approved note GO_component: GO:0042597 - periplasmic space Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73269.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Periplasmic Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006827 (DEPRECATED) high-affinity iron ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002491
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002491
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005381 iron ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002491
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000097 btuF CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000385 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001730 btuF CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001720 btuF CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001821 btuF CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001612 btuF CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000821 btuF CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003397 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001015 btuF CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0001425 btuF CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0005616 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0015418 btuF CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0003193 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001196 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000693 btuF CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008426 btuF CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006360 btuF CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000155 yadT CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004138 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009567 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007879 btuF CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006486 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076258 btuF CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000163 btuF CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000211 yadT CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005810 btuF CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006873 btuF CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000170 btuF CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0004613 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001332 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009410 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007917 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008600 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009482 btuF CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005008 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009568 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008736 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007733 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009803 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009876 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010019 btuF CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009534 btuF CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024075 btuF CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007896 btuF_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0004844 btuF CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000468 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000198 btuF CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000158 btuF CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000201 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000185 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000322 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000192 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174371 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000160 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000171 btuF CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130041 btuF CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001590 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000175 yadT CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000344 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000174 yadT CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003197 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007706 CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004117 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000815 btuF CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003496 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008504 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0063599 btuF CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001913 btuF CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003071 btuF CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004065 btuF CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0008207 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0138823 btuF CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004425 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002942 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000232 btuF CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004504 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000729 btuF CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000703 btuF CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008296 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004609 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008634 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004558 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005055 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008667 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004600 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005830 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000215 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000213 btuF CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000268 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004899 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005896 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004323 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004467 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0105750 btuF CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0081918 btuF CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000247 btuF CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0091257 btuF CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004277 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007080 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004519 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000186 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267351 CDS
Person Uncurated Go view Shigella boydii 227 ADV-0000157 yadT CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006038 btuF CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000189 yadT CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071089 yadT CDS
Person Approved Go view Shigella flexneri 301 ABT-0086512 yadT CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000147 yadT CDS
Person Approved Go view Shigella sonnei 046 ADD-0000183 btuF CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002474 VC2381 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0001502 btuF CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002980 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002287 btuF CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000133 btuF CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000465 btuF CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000888 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234903 btuF CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005096 btuF CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003459 btuF CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008173 btuF CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003971 btuF CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126707 btuF CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006418 btuF CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005906 btuF CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005892 btuF CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004245 btuF CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030441 btuF CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006647 btuF CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000862 btuF CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003559 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004874 btuF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007341 btuF CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0000788 btuF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000917 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004101 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0002702 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000053 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB23329mutantTn5 InsertionRequest the StrainABE-0000542btuFyadT::Tn5KAN-I-SceI at position 428 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 172662 to 183462
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0000526fhuBCDSforward171462173444Downstream
ABE-0285332repeat_regionforward173504173588Downstream
ABE-0000529hemLCDScomplement173602174882Downstream
ABE-0285818yadXCDSforward175048175095Downstream
ABE-0000533clcACDSforward175107176528Downstream
ABE-0285802yadWCDSforward176552176617Downstream
ABE-0000538erpACDSforward176610176954Downstream
ABE-0285333repeat_regionforward176969176987Downstream
ABE-0000540yadSCDScomplement177001177624Downstream
ABE-0000542btuFCDScomplement177662178462Matches
ABE-0000545mtnCDScomplement178455179153Overlaps Upstream
ABE-0000548dgtCDSforward179237180754Upstream
ABE-0000551degPCDSforward180884182308Upstream
ABE-0000554cdaRCDSforward182463183620Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.