ABE-0001967 (cusF) - Escherichia coli K-12 MG1655 - Feature Annotation

cusF cusX silF ylcC JW0562 ECK0565 b0573

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		Type	Annotation	Evidence	Annotated
Nomenclature
		name	cusF	Published Annotation - PubMed ID: 16397293	Jan 2006
		synonym	silF	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		synonym	cusX	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		synonym	JW0562	Published Annotation - PubMed ID: 16397293	Jan 2006
		synonym	ECK0565	Published Annotation - PubMed ID: 16397293	Jan 2006
		synonym	ylcC	Published Annotation - GenBank Accession Number: U00096 Reference: Escherichia coli MG1655	Jan 2006
		locus tag	b0573	Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu	May 2004
Product
		product	periplasmic copper-binding protein	Published Annotation - PubMed ID: 16397293	Jan 2006
		alternate product name	periplasmic copper- and silver-binding protein	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
Protein Family
		protein family	IPR021647 Copper binding periplasmic protein CusF	Protein Sequence Similarity - InterPro Domain: IPR021647 Reference: Escherichia coli K-12 MG1655	Jul 2018
		protein family	PF11604 Copper binding periplasmic protein CusF	Protein Sequence Similarity - PFAM Model Name: PF11604 Reference: Escherichia coli K-12 MG1655	Jul 2018
Other
		codon start	1	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		db xref	EcoGene:EG14234	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		db xref	GI:1786786	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		db xref	UniProtKB:P77214	Published Annotation - Swiss-Prot Accession Number: P77214	Jan 2005
		db xref	UniProtKB/Swiss-Prot:P77214	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		db xref	GeneID:945188	Published Annotation - Entrez Gene Database ID: 945188 Reference: Escherichia coli K-12 MG1655	Jun 2009
		db xref	ASAP:ABE-0001967	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		protein id	AAC73674.1	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013
		subcellular localization	Unknown	Predicted by PSORTb - PSORTb Final_Score: 2.50 Reference: Escherichia coli K-12 MG1655	Feb 2008
		subsystem	component of in silico model iAF1260	Experimental - PubMed ID: 17593909 Reference: Escherichia coli K-12 MG1655	Jan 2009
		transl table	11	Published Annotation - GenBank Accession Number: U00096.3 Reference: Escherichia coli K-12 MG1655	Oct 2013

Select	SetName	SetDetails	Notes
	stringent response	transcriptional profile of the stringent response	None
	Recombinant heat-shock data	expression data for recombinant strain under heat shock	These data are from the Harcum laboratory. (Jeremy Glasner)
	Suppressor tRNA expression	experiment comparing transcript levels in cells with and without suppressor tRNA expression	These data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
	Recombinant E. coli expression	experiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG	These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
	Aerobic shift	Aerobic shift	These data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
	Calibrator	Calibrated microarray experiments (50 hybridizations)	This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
	AffyData1	Affymetrix Experiments (data from 41 chip hybridizations)	This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)