Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002036 (entS) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002036 showshow history
Names
entS JW0583 ECK0584 ybdA b0591
Product
enterobactin exporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 622300 623550 1251 417
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR007114 (IPR007114 (DEPRECATED) Major facilitator superfamily) Apr 2008
Automated Process Approved IPR011701 (IPR011701 Major facilitator superfamily) Apr 2008
Automated Process Approved IPR010290 (IPR010290 Transmembrane secretion effector) Jul 2018
Automated Process Approved IPR036259 (IPR036259 MFS transporter superfamily) Jul 2018
Automated Process Approved PF05977 (PF05977 Transmembrane secretion effector) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name entS Published Annotation - PubMed ID: 12068807
Reference: Escherichia coli C 		Sep 2007
Person Approved synonym ybdA Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK0584 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW0583 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0591 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product enterobactin exporter Experimental - PubMed ID: 12068807
Reference: Escherichia coli C 		Sep 2007
Automated Process Approved alternate product name enterobactin exporter, iron-regulated Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name P43 Published Sequence Analysis - PubMed ID: 1787794
Reference: Escherichia coli K-12 		Oct 2007
Person Uncurated alternate product name P43 membrane protein Published Sequence Analysis - PubMed ID: 1838574
Reference: Escherichia coli K-12 		Oct 2007
Protein Family
Automated Process Approved protein family IPR007114 (DEPRECATED) Major facilitator superfamily Protein Sequence Similarity - InterPro Domain: IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011701 Major facilitator superfamily Protein Sequence Similarity - InterPro Domain: IPR011701
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036259 MFS transporter superfamily Protein Sequence Similarity - InterPro Domain: IPR036259
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR010290 Transmembrane secretion effector Protein Sequence Similarity - InterPro Domain: IPR010290
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF05977 Transmembrane secretion effector Protein Sequence Similarity - PFAM Model Name: PF05977
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.2.A.17 (transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Proton-dependent Oligopeptide Transporter (POT) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1786806 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946268 Published Annotation - Entrez Gene Database ID: 946268
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P24077 Published Annotation - Swiss-Prot Accession Number: P24077 Jan 2005
Automated Process Approved db xref UniProtKB/Swiss-Prot:P24077 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0002036 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11104 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note putative transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73692.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved regulation regulated by iron; expression of entS (referred to as P43) is down-regulated under high iron conditions, as determined by primer extension analysis Experimental - PubMed ID: 1838574
Reference: Escherichia coli K-12 		Oct 2007
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007114
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002870 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002525 entS CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002615 entS CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002870 entS CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002520 entS CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001115 entS CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001412 entS CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0001936 entS CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0005966 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0019145 cbsS CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002891 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001636 CDS
Automated Process Approved Go view Escherichia albertii TW07627 AFX-0000357 CDS
Automated Process Approved Go view Escherichia coli 101-1 (EAEC) BAB-0006498 CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000627 CDS
Automated Process Approved Go view Escherichia coli 53638 (EIEC) ADP-0005933 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000533 ybdA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003753 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009008 CDS
Automated Process Approved Go view Escherichia coli B171 (EPEC) ADN-0007537 CDS
Automated Process Approved Go view Escherichia coli B7A (ETEC) ADK-0007630 EntS CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076754 entS CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000640 entS CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000745 CDS
Automated Process Approved Go view Escherichia coli E110019 (EPEC) ADM-0007462 CDS
Automated Process Approved Go view Escherichia coli E22 (EPEC) ADL-0007038 CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000517 entS CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005058 CDS
Automated Process Approved Go view Escherichia coli EC4024 (EHEC) BBI-0001679 CDS
Automated Process Approved Go view Escherichia coli EC4042 (EHEC) BBA-0010850 CDS
Automated Process Approved Go view Escherichia coli EC4045 (EHEC) BBB-0008430 CDS
Automated Process Approved Go view Escherichia coli EC4076 (EHEC) BAZ-0005693 CDS
Automated Process Approved Go view Escherichia coli EC4113 (EHEC) BAY-0005918 CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005516 CDS
Automated Process Approved Go view Escherichia coli EC4196 (EHEC) BAX-0007292 CDS
Automated Process Approved Go view Escherichia coli EC4206 (EHEC) BAW-0009249 CDS
Automated Process Approved Go view Escherichia coli EC4401 (EHEC) BAV-0006639 CDS
Automated Process Approved Go view Escherichia coli EC4486 (EHEC) BAU-0009618 CDS
Automated Process Approved Go view Escherichia coli EC4501 (EHEC) BAT-0005857 CDS
Automated Process Approved Go view Escherichia coli EC508 (EHEC) BBJ-0005899 CDS
Automated Process Approved Go view Escherichia coli EC869 (EHEC) BBC-0006739 CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024579 ybdA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007395 entS CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005323 CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000890 CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0000586 entS CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000598 ybdA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000914 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000835 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000740 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000673 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000668 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000610 CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130524 CDS
Automated Process Approved Go view Escherichia coli TW14588 (EHEC) BBK-0005272 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000595 ybdA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000611 ybdA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003541 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006131 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0003520 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002213 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008253 CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0007417 entS CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003176 CDS
Automated Process Approved Go view Salmonella Agona SL483 BBX-0004810 CDS
Automated Process Approved Go view Salmonella Arizonae CDC 346-86 BCD-0002460 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000737 ybdA CDS
Automated Process Approved Go view Salmonella Dublin CT_02021853 BCB-0004965 CDS
Automated Process Approved Go view Salmonella Enteritidis P125109 BCF-0001894 ybdA CDS
Automated Process Approved Go view Salmonella Gallinarum 287/91 BCG-0001847 ybdA CDS
Automated Process Approved Go view Salmonella Hadar RI_05P066 BBT-0005484 CDS
Automated Process Approved Go view Salmonella Heidelberg SL476 BBV-0005070 CDS
Automated Process Approved Go view Salmonella Heidelberg SL486 BBW-0004427 CDS
Automated Process Approved Go view Salmonella Javiana GA_MM04042433 BCA-0007861 CDS
Automated Process Approved Go view Salmonella Kentucky CDC 191 BBZ-0006043 CDS
Automated Process Approved Go view Salmonella Kentucky CVM29188 BBP-0004212 CDS
Automated Process Approved Go view Salmonella Newport SL254 BBQ-0005016 CDS
Automated Process Approved Go view Salmonella Newport SL317 BBR-0007203 CDS
Automated Process Approved Go view Salmonella Paratyphi A AKU_12601 BCH-0002156 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0002141 ybdA CDS
Automated Process Approved Go view Salmonella Paratyphi B SPB7 BCC-0002983 CDS
Automated Process Approved Go view Salmonella Saintpaul SARA23 BBN-0005306 CDS
Automated Process Approved Go view Salmonella Saintpaul SARA29 BBM-0006170 CDS
Automated Process Approved Go view Salmonella Schwarzengrund CVM19633 BBO-0004841 CDS
Automated Process Approved Go view Salmonella Schwarzengrund SL480 BBY-0005923 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0106533 ybdA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083989 ybdA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000692 ybdA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092343 ybdA CDS
Automated Process Approved Go view Salmonella Virchow SL491 BBS-0008884 CDS
Automated Process Approved Go view Salmonella Weltevreden SL484 BBU-0005241 CDS
Automated Process Approved Go view Salmonella enterica CVM23701 BBL-0004982 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000643 CDS
Person Approved Go view Shigella boydii 227 ADV-0000490 ybdA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005890 CDS
Automated Process Approved Go view Shigella dysenteriae 1012 BAA-0005083 CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0000585 ybdA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071493 ybdA CDS
Person Approved Go view Shigella flexneri 301 ABT-0086858 ybdA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000571 ybdA CDS
Person Approved Go view Shigella sonnei 046 ADD-0000585 ybdA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002020 entS_1 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0009824 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001723 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20207mutantTn5 InsertionRequest the StrainABE-0002036entSybdA::Tn5KAN-I-SceI at position 1174 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 617300 to 628550
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002021entFCDSforward614157618038Upstream
ABE-0002023fepECDSforward618254619387Upstream
ABE-0002025fepCCDScomplement619384620199Upstream
ABE-0002027fepGCDScomplement620196621188Upstream
ABE-0002031fepDCDScomplement621185622189Upstream
ABE-0002036entSCDSforward622300623550Matches
ABE-0002038fepBCDScomplement623554624510Downstream
ABE-0002047entCCDSforward624885626060Downstream
ABE-0002049entECDSforward626070627680Downstream
ABE-0002052entBCDSforward627694628551Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.