Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002296 (umpH) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002296 showshow history
Names
umpH JW0661 ECK0663 nagD b0675
Product
UMP phosphatase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 699574 700326 753 251
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006357 (IPR006357 HAD-superfamily hydrolase, subfamily IIA) Apr 2008
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Apr 2008
Automated Process Approved IPR036412 (IPR036412 HAD-like superfamily) Jul 2018
Automated Process Approved PF13344 (PF13344 Haloacid dehalogenase-like hydrolase) Jul 2018
Automated Process Approved PF13242 (PF13242 HAD-hyrolase-like) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0046349 amino sugar biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006357
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006357
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name umpH Published Annotation - PubMed ID: 23903661
Reference: Escherichia coli K-12 		Jun 2020
Person Approved synonym nagD Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK0663 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW0661 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0675 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product UMP phosphatase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name putative phosphatase in N-acetylglucosamine metabolism Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name N-acetylglucosamine metabolism Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR006357 HAD-superfamily hydrolase, subfamily IIA Protein Sequence Similarity - InterPro Domain: IPR006357
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036412 HAD-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036412
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF13344 Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - PFAM Model Name: PF13344
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF13242 HAD-hyrolase-like Protein Sequence Similarity - PFAM Model Name: PF13242
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated EC number 3.-.-.- Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 MG1655 		Dec 2008
Person Uncurated MultiFun 1.7.12 (metabolism; central intermediary metabolism; amino sugar conversions) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10634 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1786890 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945283 Published Annotation - Entrez Gene Database ID: 945283
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P0AF24 Published Annotation - Swiss-Prot Accession Number: P0AF24 Jan 2006
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AF24 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0002296 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Central intermediary metabolism: Amino sugars Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note N-acetylglucosamine metabolism; GO_process: GO:0046349 - amino sugar biosynthetic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73769.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006357
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0046349 amino sugar biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006357
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0005376 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002149 nagD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002218 nagD CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001670 nagD CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002295 umpH CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001263 CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002998 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001485 nagD CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002017 nagD CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001708 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0299668 nagD CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001275 nagD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002409 nagD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000276 nagD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009568 nagD CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000694 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005849 nagD CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000595 nagD CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003691 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008917 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009520 nagD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009935 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076833 umpH CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000726 CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000833 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010555 nagD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006949 nagD CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000588 nagD CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005147 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005962 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010938 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008518 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005783 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010743 nagD CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005606 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010494 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009337 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010216 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006552 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010846 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010535 nagD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006829 nagD CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024657 nagD CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009206 nagD CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005400 nagD CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000954 CDS
Automated Process Uncurated Go view Escherichia coli K-12 DH10B AEC-0004425 nagD CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000681 nagD CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000961 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000917 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000800 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000750 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000752 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000694 nagD CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130606 nagD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005349 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000671 nagD CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000743 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001957 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000698 nagD CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003609 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000440 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002873 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000480 nagD CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003732 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001194 nagD CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003080 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008847 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0002867 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0291234 nagD CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004283 nagD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004906 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002376 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000839 nagD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005061 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002169 nagD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002104 nagD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008710 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005165 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004522 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007946 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005102 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004308 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005110 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008968 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002073 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002060 nagD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002875 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005400 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008964 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004926 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006009 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0106696 nagD CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0083908 nagD CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000794 nagD CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092587 nagD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008793 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006539 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007127 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004632 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0266367 CDS
Person Approved Go view Shigella boydii 227 ADV-0000580 nagD CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005973 nagD CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000682 nagD CDS
Person Approved Go view Shigella flexneri 301 ABT-0086963 nagD pseudogene
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000691 nagD CDS
Person Approved Go view Shigella sonnei 046 ADD-0000677 nagD CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0003542 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002961 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008652 nagD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003148 nagD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001212 nagD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002220 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004440 nagD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002973 nagD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006531 nagD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000848 nagD CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124073 nagD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004516 nagD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005315 nagD CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007003 nagD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004691 nagD CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030867 nagD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008544 nagD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001347 nagD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003154 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005351 nagD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006910 nagD CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001176 nagD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001384 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003570 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0010072 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001780 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 694574 to 705326
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002260miaBCDScomplement693531694955Downstream
ABE-0002265ubiFCDSforward695101696276Downstream
ABE-0285387repeat_regionforward696307696377Downstream
ABE-0002272glnXtRNAcomplement696430696504Downstream
ABE-0002274glnVtRNAcomplement696542696616Downstream
ABE-0002276metUtRNAcomplement696664696740Downstream
ABE-0002280glnWtRNAcomplement696756696830Downstream
ABE-0002284glnUtRNAcomplement696865696939Downstream
ABE-0002288leuWtRNAcomplement696963697047Downstream
ABE-0002290metTtRNAcomplement697057697133Downstream
ABE-0002292asnBCDScomplement697513699177Downstream
ABE-0285388repeat_regionforward699425699522Downstream
ABE-0002296umpHCDScomplement699574700326Matches
ABE-0002299nagCCDScomplement700374701594Upstream
ABE-0002301nagACDScomplement701603702751Upstream
ABE-0002304nagBCDScomplement702811703611Upstream
ABE-0002312nagECDSforward703944705890Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.