Escherichia coli K-12 MG1655
Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002376 (kdpB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002376 showshow history
Names
kdpB JW0685 ECK0685 kac b0697
Product
potassium translocating ATPase subunit B
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 724988 727036 2049 683
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006391 (IPR006391 P-type ATPase, B chain, subfamily IA) Apr 2008
Automated Process Approved IPR001757 (IPR001757 P-type ATPase) Apr 2008
Automated Process Approved IPR008250 (IPR008250 P-type ATPase, A domain superfamily) Apr 2008
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Apr 2008
Automated Process Approved IPR023298 (IPR023298 P-type ATPase, transmembrane domain superfamily) Jul 2018
Automated Process Approved IPR036412 (IPR036412 HAD-like superfamily) Jul 2018
Automated Process Approved IPR023299 (IPR023299 P-type ATPase, cytoplasmic domain N) Jul 2018
Automated Process Approved PF00122 (PF00122 E1-E2 ATPase) Jul 2018
Automated Process Approved PF00702 (PF00702 haloacid dehalogenase-like hydrolase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655
Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR023299
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Person Uncurated GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name kdpB Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Oct 1998
Person Approved synonym kac Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym ECK0685 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW0685 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0697 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product potassium translocating ATPase subunit B Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12
Oct 2021
Person Uncurated alternate product name P-type ATPase, high-affinity potassium transport system, B chain, a phophatase-like domain Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name ATPase of high-affinity potassium transport system, B chain Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Jan 2006
Protein Family
Automated Process Approved protein family IPR001757 P-type ATPase Protein Sequence Similarity - InterPro Domain: IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR023299 P-type ATPase, cytoplasmic domain N Protein Sequence Similarity - InterPro Domain: IPR023299
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family PF00122 E1-E2 ATPase Protein Sequence Similarity - PFAM Model Name: PF00122
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family PF00702 haloacid dehalogenase-like hydrolase Protein Sequence Similarity - PFAM Model Name: PF00702
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR023298 P-type ATPase, transmembrane domain superfamily Protein Sequence Similarity - InterPro Domain: IPR023298
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR036412 HAD-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036412
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR008250 P-type ATPase, A domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008250
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR006391 P-type ATPase, B chain, subfamily IA Protein Sequence Similarity - InterPro Domain: IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 MG1655
Apr 2008
Other
Person Uncurated EC number 7.2.2.6 Published Annotation - Swiss-Prot Accession Number: P03960
Reference: Escherichia coli K-12
Dec 2019
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.96 (transport; substrate; K+) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.3 (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The P-type ATPase (P-ATPase) Superfamily) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref ASAP:ABE-0002376 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref EcoGene:EG10514 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved db xref UniProtKB:P03960 Published Annotation - Swiss-Prot Accession Number: P03960 Jan 2005
Automated Process Approved db xref GI:1786914 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref GeneID:947450 Published Annotation - Entrez Gene Database ID: 947450
Reference: Escherichia coli K-12 MG1655
Jun 2009
Automated Process Approved db xref UniProtKB/Swiss-Prot:P03960 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved function enzyme; Transport of small molecules: Cations Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Oct 1998
Automated Process Approved note ATPase of high-affinity potassium transport system, B chain; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved protein id AAC73791.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655
Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655
Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655
Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655
Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655
Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006391
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR023299
Reference: Escherichia coli K-12 MG1655
Jul 2018
Person Uncurated GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002254 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001700 kdpB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001324 kdpB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001798 kdpB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001469 kdpB CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0002142 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001280 kdpB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002976 kdpB CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001508 kdpB CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002038 kdpB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007896 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0016969 kdpB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001224 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001728 kdpB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0306788 kdpB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003801 kdpB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003473 kdpB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000254 kdpB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008555 kdpB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000723 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005824 kdpB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000622 kdpB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003657 kdpB CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008892 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008763 kdpB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007470 kdpB pseudogene
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076866 kdpB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000748 kdpB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000854 kdpB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009297 kdpB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009382 kdpB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000617 kdpB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005170 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002717 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010963 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008542 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005807 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008727 kdpB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005630 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009597 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009363 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009072 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006576 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010511 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010264 kdpB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007168 kdpB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024679 kdpB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009324 kdpB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005424 kdpB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000985 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000678 kdpB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000703 kdpB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000981 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000939 kdpB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000776 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000781 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174872 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000774 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000718 kdpB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130626 kdpB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005374 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000703 kdpB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000764 kdpB CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001977 kdpB CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000718 kdpB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003626 kdpB CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005689 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002944 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0000446 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003074 kdpB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0000910 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0003897 kdpB CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0000257 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0011512 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0000585 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288374 kdpB CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006825 kdpB CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061593 kdpB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000758 kdpB CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001559 kdpB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005917 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0139985 kdpB CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0002287 kdpB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004931 kdpB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002351 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000863 kdpB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005087 kdpB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002255 kdpB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002189 kdpB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008644 kdpB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005192 kdpB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004549 kdpB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007157 kdpB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005127 kdpB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004334 kdpB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005136 kdpB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008941 kdpB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002049 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002036 kdpB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002844 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005427 kdpB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007997 kdpB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004953 kdpB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008039 kdpB CDS
Automated Process Approved Go view Salmonella Typhi CT18 ABX-0106754 kdpB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000825 kdpB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092670 kdpB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008765 kdpB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006512 kdpB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007154 kdpB CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004610 kdpB CDS
Person Approved Go view Shigella boydii 227 ADV-0000602 kdpB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005949 kdpB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006684 kdpB CDS
Person Uncurated Go view Shigella flexneri 2457T ABQ-0071602 kdpB pseudogene
Person Approved Go view Shigella flexneri 301 ABT-0086948 kdpB pseudogene
Person Approved Go view Shigella sonnei 046 ADD-0000696 kdpB CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0002460 kdpB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003500 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008568 kdpB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003686 kdpB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002139 kdpB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002200 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240334 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007703 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002912 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006460 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000789 kdpB CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124301 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004448 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005385 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002278 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006218 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004763 kdpB CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030934 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007265 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001427 kdpB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001887 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005283 kdpB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005062 kdpB CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003013 kdpB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003621 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001358 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0010182 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001802 kdpB CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)

Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20220mutantTn5 InsertionRequest the StrainABE-0002376kdpBkdpB::Tn5KAN-2 at position 1504 in Minus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 719988 to 732036
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002362speFCDScomplement718262720460Downstream
ABE-0285828speFLCDScomplement720718720822Downstream
ABE-0002366kdpECDScomplement721056721733Downstream
ABE-0002368kdpDCDScomplement721730724414Downstream
ABE-0002374kdpCCDScomplement724407724979Downstream
ABE-0002376kdpBCDScomplement724988727036Matches
ABE-0002381kdpACDScomplement727059728732Upstream
ABE-0285034kdpFCDScomplement728732728821Upstream
ABE-0002386ybfACDSforward729134729340Upstream
ABE-0002392rhsCCDSforward729583733776Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.