Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002381 (kdpA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002381 showshow history
Names
kdpA JW0686 ECK0686 kac b0698
Product
high-affinity potassium transport system ATPase subunit A
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 727059 728732 1674 558
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000276
EnteroFam0002381: Trusted threshold=1395.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR004623 (IPR004623 Potassium-transporting ATPase A chain) Apr 2008
Automated Process Approved PF03814 (PF03814 Potassium-transporting ATPase A subunit) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: GO:MultiFun2Go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Approved GO cellular component GO:0005886 plasma membrane Experimental - PubMed ID: 9858692
Reference: Escherichia coli 		Jun 2006
Person Uncurated GO cellular component GO:0016021 integral component of membrane Experimental - PubMed ID: 9858692
Reference: Escherichia coli 		Jun 2006
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: GO:spkw2go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Person Approved GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: GO:spkw2go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name kdpA Published Annotation - PubMed ID: 356049
Reference: Escherichia coli K-12 		Sep 2007
Person Approved synonym JW0686 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym kac Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym ECK0686 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b0698 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product high-affinity potassium transport system ATPase subunit A Experimental - PubMed ID: 356049
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name ATPase of high-affinity potassium transport system, A chain Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Approved alternate product name potassium translocating ATPase, subunit A Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0002381: Trusted threshold=1395.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000276
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family PF03814 Potassium-transporting ATPase A subunit Protein Sequence Similarity - PFAM Model Name: PF03814
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004623 Potassium-transporting ATPase A chain Protein Sequence Similarity - InterPro Domain: IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated EC number 7.2.2.6 Published Annotation - EcoCyc Accession Number: EG10513
Reference: Escherichia coli K-12 MG1655 		Dec 2019
Person Uncurated MultiFun 4.3.A.3 (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The P-type ATPase (P-ATPase) Superfamily) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.96 (transport; substrate; K+) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10513 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P03959 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0002381 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P03959 Published Annotation - Swiss-Prot Accession Number: P03959 Jan 2005
Automated Process Approved db xref GeneID:946045 Published Annotation - Entrez Gene Database ID: 946045
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1786915 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Transport of small molecules: Cations Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note ATPase of high-affinity potassium transport system, A chain; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73792.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: GO:MultiFun2Go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO cellular component GO:0005886 plasma membrane Experimental - PubMed ID: 9858692
Reference: Escherichia coli 		Jun 2006
Person Uncurated GO cellular component GO:0016021 integral component of membrane Experimental - PubMed ID: 9858692
Reference: Escherichia coli 		Jun 2006
Automated Process Approved GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Approved GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: GO:spkw2go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Person Uncurated GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: GO:spkw2go
Reference: Escherichia coli K-12 MG1655 		Jun 2006
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000276 kdpA CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002255 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001651 kdpA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001579 kdpA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001785 kdpA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001634 kdpA CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0002143 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001281 kdpA CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002975 kdpA CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001509 kdpA CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0002039 kdpA CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007894 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016968 kdpA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001225 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001729 kdpA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0306793 kdpA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003802 kdpA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003474 kdpA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000253 kdpA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008554 kdpA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000724 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005823 kdpA CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000623 kdpA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003656 kdpA CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008890 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008762 kdpA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007469 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076867 kdpA CDS
Person Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000749 kdpA pseudogene
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000855 kdpA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009296 kdpA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009383 kdpA CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000618 kdpA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005171 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002718 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010964 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008543 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005808 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008728 kdpA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005631 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009598 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009364 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009073 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006577 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010512 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010263 kdpA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007169 kdpA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024680 kdpA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009323 kdpA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005425 kdpA CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0000986 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000679 kdpA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000704 kdpA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0000980 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000940 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000775 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000782 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000775 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000719 kdpA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130627 kdpA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005375 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000704 kdpA CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000765 kdpA CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001978 kdpA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000719 kdpA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003627 kdpA CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005690 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002945 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0000447 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003075 kdpA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0000909 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0003898 kdpA CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0000256 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0011513 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0000586 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288373 kdpA CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006826 kdpA CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061594 kdpA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000757 kdpA CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003655 kdpA CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005918 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0139988 kdpA CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0002286 kdpA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004932 kdpA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002350 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000864 kdpA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005088 kdpA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002261 kdpA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002195 kdpA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008645 kdpA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005193 kdpA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004550 kdpA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007158 kdpA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005128 kdpA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004335 kdpA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005137 kdpA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008940 kdpA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002048 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0002035 kdpA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002843 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005428 kdpA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007996 kdpA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004954 kdpA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008040 kdpA CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0106758 kdpA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083883 kdpA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000827 kdpA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092673 kdpA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008764 kdpA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006511 kdpA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007155 kdpA CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004609 kdpA CDS
Person Approved Go view Shigella boydii 227 ADV-0000603 kdpA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0005948 kdpA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006685 kdpA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071601 kdpA CDS
Person Approved Go view Shigella flexneri 301 ABT-0086947 kdpA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000670 kdpA CDS
Person Approved Go view Shigella sonnei 046 ADD-0000697 kdpA CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0002461 kdpA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003499 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008563 kdpA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003687 kdpA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002140 kdpA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002199 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240342 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007704 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002913 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006459 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000788 kdpA CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124311 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004447 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005386 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001326 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006219 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004764 kdpA CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030935 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007266 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001428 kdpA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001885 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005282 kdpA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005064 kdpA CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0003012 kdpA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003620 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001359 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0010185 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001803 kdpA CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 722059 to 733732
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002368kdpDCDScomplement721730724414Downstream
ABE-0002374kdpCCDScomplement724407724979Downstream
ABE-0002376kdpBCDScomplement724988727036Downstream
ABE-0002381kdpACDScomplement727059728732Matches
ABE-0285034kdpFCDScomplement728732728821Overlaps Upstream
ABE-0002386ybfACDSforward729134729340Upstream
ABE-0002392rhsCCDSforward729583733776Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.