Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002603 (modB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002603 showshow history
Names
modB JW0747 ECK0753 chlJ b0764
Product
membrane component of an ABC superfamily molybdate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 795862 796551 690 230
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000308
EnteroFam0002603: Trusted threshold=598.2; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR000515 (IPR000515 ABC transporter type 1, transmembrane domain MetI-like) Apr 2008
Automated Process Approved IPR011867 (IPR011867 Molybdate ABC transporter, permease protein) Apr 2008
Automated Process Approved IPR035906 (IPR035906 MetI-like superfamily) Jul 2018
Automated Process Approved PF00528 (PF00528 Binding-protein-dependent transport system inner membrane component) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - Database Name:Identifier: GO:MultiFun2GO
Reference: Escherichia coli K-12 MG1655 		Jan 2007
Automated Process Approved GO molecular function GO:0015098 molybdate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name modB Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym JW0747 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK0753 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym chlJ Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved locus tag b0764 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product membrane component of an ABC superfamily molybdate transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name molybdate transport permease protein Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name molybdate transport protein (ABC superfamily, membrane) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name molybdate transporter subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0002603: Trusted threshold=598.2; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000308
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR035906 MetI-like superfamily Protein Sequence Similarity - InterPro Domain: IPR035906
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR011867 Molybdate ABC transporter, permease protein Protein Sequence Similarity - InterPro Domain: IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00528 Binding-protein-dependent transport system inner membrane component Protein Sequence Similarity - PFAM Model Name: PF00528
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000515 ABC transporter type 1, transmembrane domain MetI-like Protein Sequence Similarity - InterPro Domain: IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.124 (transport; substrate; molybdate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.1.m (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10002 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0002603 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1786980 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AF01 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945361 Published Annotation - Entrez Gene Database ID: 945361
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P0AF01 Published Annotation - Swiss-Prot Accession Number: P0AF01 Jan 2006
Person Approved function transport; Transport of small molecules: Anions Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note molybdate transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC73851.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - Database Name:Identifier: GO:MultiFun2GO
Reference: Escherichia coli K-12 MG1655 		Jan 2007
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015098 molybdate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000308 modB CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001319 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001172 modB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001421 modB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001939 modB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001363 modB CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0003591 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0004402 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001317 modB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002930 modB CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001590 modB CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002105 modB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007835 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0020568 modB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001275 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001773 modB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0299878 modB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001347 modB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002342 modB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000173 modB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009107 modB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000783 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005750 modB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000669 modB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003605 modB CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008809 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009491 modB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008834 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076932 modB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001026 modB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0000921 modB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007992 modB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009449 modB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000681 modB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005237 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001919 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009570 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008619 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005884 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008370 modB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005707 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009068 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009443 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008984 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006653 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008930 modB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008516 modB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007245 modB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024763 modB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009460 modB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005497 modB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001036 modB CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000733 modB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000771 modB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001097 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001017 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0000950 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000841 modB CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174925 modB pseudogene
Automated Process Approved Go view Escherichia coli SE11 AFS-0000841 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000786 modB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130701 modB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005445 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000764 modB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000820 modB CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003680 modB CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000780 modB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003677 modB CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005750 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000503 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0000680 modB CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000547 modB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003664 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001261 modB CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003013 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008917 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0002929 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0287541 modB CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004349 modB CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061648 modB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000804 modB CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003659 modB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004128 modB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005987 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0140131 modB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004996 modB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002271 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000935 modB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005151 modB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002468 modB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002390 modB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008110 modB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005274 modB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004631 modB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007228 modB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005192 modB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004400 modB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005216 modB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007741 modB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001982 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0001970 modB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002751 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005503 modB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005854 modB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005021 modB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006044 modB CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0106882 modB CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083819 modB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000910 modB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092900 modB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008687 modB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006434 modB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008487 modB CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004551 modB CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267506 modB CDS
Person Approved Go view Shigella boydii 227 ADV-0000665 modB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0006082 modB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007984 modB CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0000795 modB CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071534 modB CDS
Person Approved Go view Shigella flexneri 301 ABT-0086888 modB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000610 modB CDS
Person Approved Go view Shigella sonnei 046 ADD-0000767 modB CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003615 VCA0725 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0002539 modB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002907 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008405 chlJ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002333 modB_2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003608 modB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003126 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236605 modB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005530 modB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001283 modB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005210 modB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002221 modB CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119015 modB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008050 modB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004797 modB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003497 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007658 modB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005375 modB CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032783 modB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005491 modB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003430 modB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003063 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006339 modB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006839 modB CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0001245 modB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001486 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003486 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0010378 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004634 modB CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20235mutantTn5 InsertionRequest the StrainABE-0002603modBmodB::Tn5KAN-2 at position 517 in Minus orientation ,- pKD46 Insertion site is approximate0Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 790862 to 801551
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002573galTCDScomplement789983791029Upstream
ABE-0002575galECDScomplement791039792055Upstream
ABE-0285398repeat_regionforward792264792297Upstream
ABE-0002582modFCDScomplement792316793788Upstream
ABE-0002585modECDScomplement793856794644Upstream
ABE-0002595acrZCDSforward794773794922Upstream
ABE-0002601modACDSforward795089795862Overlaps Upstream
ABE-0002603modBCDSforward795862796551Matches
ABE-0002605modCCDSforward796554797612Downstream
ABE-0002607ybhACDScomplement797613798431Downstream
ABE-0002611pglCDSforward798586799581Downstream
ABE-0002613ybhDCDScomplement799622800575Downstream
ABE-0002618ybhHCDSforward800759801811Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.