Escherichia coli K-12 MG1655
Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0002823 (moeA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0002823 showshow history
Names
moeA cspD narE JW0811 ECK0817 chlE bisB b0827
Product
molybdopterin biosynthesis protein
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 865129 866364 1236 412
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000332
EnteroFam0002823: Trusted threshold=1041.1; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043).
Jan 2006
Automated Process Approved IPR001453 (IPR001453 MoaB/Mog domain) Apr 2008
Automated Process Approved IPR005110 (IPR005110 MoeA, N-terminal and linker domain) Apr 2008
Automated Process Approved IPR012088 (IPR012088 (DEPRECATED) Molybdenum cofactor molybdenum incorporation protein MoeA) Apr 2008
Automated Process Approved IPR005111 (IPR005111 MoeA, C-terminal, domain IV) Apr 2008
Automated Process Approved IPR008284 (IPR008284 Molybdenum cofactor biosynthesis, conserved site) Apr 2008
Automated Process Approved IPR038987 (IPR038987 Molybdopterin biosynthesis protein MoeA-like) Jul 2018
Automated Process Approved IPR036135 (IPR036135 MoeA, N-terminal and linker domain superfamily) Jul 2018
Automated Process Approved IPR036425 (IPR036425 MoaB/Mog-like domain superfamily) Jul 2018
Automated Process Approved IPR036688 (IPR036688 MoeA, C-terminal, domain IV superfamily) Jul 2018
Automated Process Approved PF00994 (PF00994 Probable molybdopterin binding domain) Jul 2018
Automated Process Approved PF03454 (PF03454 MoeA C-terminal region (domain IV)) Jul 2018
Automated Process Approved PF03453 (PF03453 MoeA N-terminal region (domain I and II)) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0032324 molybdopterin cofactor biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005111, IPR005110, IPR036135, IPR036688
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved GO biological process GO:0006777 Mo-molybdopterin cofactor biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001453
Reference: Escherichia coli K-12 MG1655
Apr 2008
Person Uncurated GO biological process GO:0006777 Mo-molybdopterin cofactor biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655
Feb 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name moeA Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655
Sep 2007
Person Approved synonym ECK0817 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym cspD Published Annotation - GenBank Accession Number: BX936398
Reference: Yersinia pseudotuberculosis IP32953
Sep 2007
Automated Process Approved synonym narE Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved synonym chlE Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW0811 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym bisB Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved locus tag b0827 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product molybdopterin biosynthesis protein Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name molybdopterin biosynthesis protein Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved alternate product name molybdopterin biosynthesis Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0002823: Trusted threshold=1041.1; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000332
Reference: EnteroFams
Jan 2006
Automated Process Approved protein family IPR012088 (DEPRECATED) Molybdenum cofactor molybdenum incorporation protein MoeA Protein Sequence Similarity - InterPro Domain: IPR012088
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR005110 MoeA, N-terminal and linker domain Protein Sequence Similarity - InterPro Domain: IPR005110
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR005111 MoeA, C-terminal, domain IV Protein Sequence Similarity - InterPro Domain: IPR005111
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR001453 MoaB/Mog domain Protein Sequence Similarity - InterPro Domain: IPR001453
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Approved protein family IPR036688 MoeA, C-terminal, domain IV superfamily Protein Sequence Similarity - InterPro Domain: IPR036688
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family PF03454 MoeA C-terminal region (domain IV) Protein Sequence Similarity - PFAM Model Name: PF03454
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family PF03453 MoeA N-terminal region (domain I and II) Protein Sequence Similarity - PFAM Model Name: PF03453
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family PF00994 Probable molybdopterin binding domain Protein Sequence Similarity - PFAM Model Name: PF00994
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR036425 MoaB/Mog-like domain superfamily Protein Sequence Similarity - InterPro Domain: IPR036425
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR038987 Molybdopterin biosynthesis protein MoeA-like Protein Sequence Similarity - InterPro Domain: IPR038987
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR036135 MoeA, N-terminal and linker domain superfamily Protein Sequence Similarity - InterPro Domain: IPR036135
Reference: Escherichia coli K-12 MG1655
Jul 2018
Automated Process Approved protein family IPR008284 Molybdenum cofactor biosynthesis, conserved site Protein Sequence Similarity - InterPro Domain: IPR008284
Reference: Escherichia coli K-12 MG1655
Apr 2008
Other
Person Uncurated MultiFun 1.5.3.4 (metabolism; building block biosynthesis; cofactor, small molecule carrier; molybdenum) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref ASAP:ABE-0002823 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P12281 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved db xref UniProtKB:P12281 Published Annotation - Swiss-Prot Accession Number: P12281 Jan 2005
Automated Process Approved db xref EcoGene:EG10153 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved db xref GeneID:945454 Published Annotation - Entrez Gene Database ID: 945454
Reference: Escherichia coli K-12 MG1655
Jun 2009
Automated Process Approved db xref GI:1787049 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Person Approved function enzyme; Biosynthesis of cofactors, carriers: Molybdopterin Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Oct 1998
Automated Process Approved note molybdopterin biosynthesis; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Approved protein id AAC73914.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655
Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0032324 molybdopterin cofactor biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005111, IPR005110, IPR036135, IPR036688
Reference: Escherichia coli K-12 MG1655
Jul 2018
Person Uncurated GO biological process GO:0006777 Mo-molybdopterin cofactor biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006777 Mo-molybdopterin cofactor biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001453
Reference: Escherichia coli K-12 MG1655
Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655
Feb 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000332 moeA CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000259 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000879 moeA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000836 moeA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001103 moeA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000427 moeA CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0001264 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0001188 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002954 moeA CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001151 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001656 moeA CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002176 moeA CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007432 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0020197 moeA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001576 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001854 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0300121 moeA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001438 moeA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002262 moeA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000055 moeA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007655 moeA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000847 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005681 moeA CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000732 moeA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003540 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008715 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007774 moeA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006311 MoeA CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0077003 moeA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000826 moeA CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001060 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007803 moeA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008211 moeA CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000822 moeA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005344 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002040 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009679 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008729 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005995 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008118 moeA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005817 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008949 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009559 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008557 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006765 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008892 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007604 moeA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007356 moeA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024873 moeA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008934 moeA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005564 moeA CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001161 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000795 moeA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000835 moeA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001121 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001084 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001014 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0000912 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0174995 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000909 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000851 moeA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130818 moeA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005566 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000832 moeA CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000966 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002101 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000862 moeA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003756 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007278 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000603 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0001188 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000633 moeA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003574 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001347 moeA CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0002926 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009027 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003018 CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004440 moeA CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0063109 moeA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001647 moeA CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000734 moeA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004377 moeA CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0006260 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0140275 moeA CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0002397 moeA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005065 moeA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002184 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001000 moeA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005220 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002671 moeA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002588 moeA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008044 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005341 moeA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004697 moeA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007298 moeA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005269 moeA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004477 moeA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005284 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007816 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001921 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0001909 moeA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002664 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005570 moeA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005775 moeA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005086 moeA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006109 moeA CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0107027 moeA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083757 moeA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0000990 moeA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0093097 moeA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008588 moeA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006360 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006349 moeA CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004265 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0263677 moeA CDS
Person Approved Go view Shigella boydii 227 ADV-0000781 moeA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007932 moeA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005676 moeA CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0000854 moeA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0071827 moeA CDS
Person Approved Go view Shigella flexneri 301 ABT-0087133 moeA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000854 moeA CDS
Person Approved Go view Shigella sonnei 046 ADD-0000870 moeA CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003507 VCA0617 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0002641 moeA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001128 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008157 bisB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002252 bisB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001309 moeA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002572 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237531 moeA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007118 moeA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000963 moeA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005621 moeA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001780 moeA CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120216 moeA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005627 moeA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004420 moeA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001314 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009039 moeA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004956 moeA CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032406 moeA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007812 moeA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002986 moeA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001773 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006621 moeA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006463 moeA CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0001583 moeA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001920 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003058 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0010729 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004558 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)

Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20242mutantTn5 InsertionRequest the StrainABE-0002823moeAmoeA::Tn5KAN-2 at position 849 in Plus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 860129 to 871364
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0002810ybiWCDScomplement860174862606Downstream
ABE-0002812ybiYCDScomplement862612863511Downstream
ABE-0002818fsaACDSforward863642864304Downstream
ABE-0285407repeat_regionforward864333864370Downstream
ABE-0002820moeBCDScomplement864380865129Overlaps Downstream
ABE-0002823moeACDScomplement865129866364Matches
ABE-0002828iaaACDSforward866568867533Upstream
ABE-0002830gsiACDSforward867520869391Upstream
ABE-0002832gsiBCDSforward869411870949Upstream
ABE-0002834gsiCCDSforward870967871887Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.