Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0003180 (ssuA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0003180 showshow history
Names
ssuA JW0919 ECK0927 ycbO b0936
Product
periplasmic-binding component of an ABC superfamily alkanesulfonate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 995985 996944 960 320
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR015168 (IPR015168 SsuA/THI5-like) Apr 2008
Automated Process Approved IPR010067 (IPR010067 Aliphatic sulfonates-binding protein) Apr 2008
Automated Process Approved IPR001638 (IPR001638 Solute-binding protein family 3/N-terminal domain of MltF) Apr 2008
Automated Process Approved PF09084 (PF09084 NMT1/THI5 like) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006790 sulfur compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR010067
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ssuA Experimental - PubMed ID: 10506196
Reference: Escherichia coli 		Aug 2002
Person Approved synonym ECK0927 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW0919 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ycbO Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved locus tag b0936 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product periplasmic-binding component of an ABC superfamily alkanesulfonate transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2008
Person Uncurated alternate product name putative aliphatic sulfonates binding protein Experimental - PubMed ID: 10506196
Reference: Escherichia coli 		Jan 2006
Person Uncurated alternate product name alkanesulfonate transport protein (ABC superfamily, peri_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name aliphatic sulfonate binding protein, SsuABC ABC transporter Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Automated Process Approved protein family IPR015168 SsuA/THI5-like Protein Sequence Similarity - InterPro Domain: IPR015168
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF09084 NMT1/THI5 like Protein Sequence Similarity - PFAM Model Name: PF09084
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Protein Sequence Similarity - InterPro Domain: IPR001638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR010067 Aliphatic sulfonates-binding protein Protein Sequence Similarity - InterPro Domain: IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 4.3.A.1.p (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.8.1 (metabolism; metabolism of other compounds; phosphorous metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.2 (location of gene products; periplasmic space) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.5 (transport; substrate; alkanesulfonate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13707 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0003180 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P75853 Published Annotation - Swiss-Prot Accession Number: P75853 Jan 2005
Automated Process Approved db xref GI:87081803 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945560 Published Annotation - Entrez Gene Database ID: 945560
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref UniProtKB/Swiss-Prot:P75853 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74022.2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.50
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006790 sulfur compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010067
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR010067
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002127 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002537 ssuA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002498 ssuA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001925 ssuA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002779 ssuA CDS
Ortholog
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0000767 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001496 ssuA CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002718 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001764 ssuA CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002269 ssuA CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0006389 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0019874 ssuA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002452 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002042 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0300401 ssuA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001528 ssuA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002187 ssuA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008009 CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000956 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005545 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000884 ssuA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003425 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008525 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007935 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007187 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0077171 ssuA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0000939 ssuA CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001262 ssuA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010503 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008407 CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000976 ssuA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005495 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004448 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009801 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008850 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010489 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009302 CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005938 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008803 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008957 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009346 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008514 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007671 CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0025100 ssuA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007196 ssuA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005723 CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001236 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0000901 ssuA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0000945 ssuA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001233 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001196 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001163 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001029 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175169 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001022 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002182 CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0130933 ssuA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005703 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001011 ycbO CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0001061 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0000974 ssuA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003914 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006316 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000688 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0001273 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000718 ssuA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003487 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001430 ssuA CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0002832 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009115 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003101 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288189 ssuA CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004528 ssuA CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064748 ssuA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0004220 CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003004 ssuA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000792 ssuA CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0004456 CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0000352 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004066 CDS
Person Uncurated Go view Shigella boydii 227 ADV-0002470 ycbO CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007794 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007176 CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0002673 ycbO CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072033 ycbO CDS
Person Approved Go view Shigella flexneri 301 ABT-0087287 ycbO CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0000996 ycbO CDS
Person Approved Go view Shigella sonnei 046 ADD-0001009 ycbO CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004340 ssuA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008246 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003839 ssuA CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0127452 ssuA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008507 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007869 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000639 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006650 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006732 CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029835 ssuA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006343 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004260 ssuA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000268 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008261 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004292 CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003717 ssuA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004523 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000487 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0011394 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004435 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB22150mutantTn5 InsertionRequest the StrainABE-0003180ssuAycbO::Tn5KAN-I-SceI at position 763 in Minus orientation ,+ pKD465Blattner Laboratory
FB22309mutantTn5 InsertionRequest the StrainABE-0003180ssuAycbO::Tn5KAN-I-SceI at position 763 in Minus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 990985 to 1001944
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0003171pepNCDSforward990622993234Downstream
ABE-0003173ssuBCDScomplement993277994044Downstream
ABE-0003175ssuCCDScomplement994041994832Downstream
ABE-0003178ssuDCDScomplement994843995988Overlaps Downstream
ABE-0003180ssuACDScomplement995985996944Matches
ABE-0003182ssuECDScomplement996937997512Overlaps Upstream
ABE-0003185elfACDSforward997868998407Upstream
ABE-0003187elfDCDSforward998490999191Upstream
ABE-0003189elfCCDSforward9992161001816Upstream
ABE-0003191elfGCDSforward10018071002877Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.