Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0003722 (ptsG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0003722 showshow history
Names
ptsG JW1087 umgC glcA tgl ECK1087 umg car gpt cat CR b1101
Product
PTS system glucose-specific IICB component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1157869 1159302 1434 478
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001996 (IPR001996 Phosphotransferase system, IIB component, type 1) Apr 2008
Automated Process Approved IPR011299 (IPR011299 PTS system glucose-specific IIBC component) Apr 2008
Automated Process Approved IPR004719 (IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component) Apr 2008
Automated Process Approved IPR011535 (IPR011535 (DEPRECATED) Phosphotransferase system, glucose-like IIB component) Apr 2008
Automated Process Approved IPR013013 (IPR013013 Phosphotransferase system, EIIC component, type 1) Apr 2008
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Apr 2008
Automated Process Approved IPR018113 (IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site) Jul 2018
Automated Process Approved IPR036878 (IPR036878 Glucose permease domain IIB) Jul 2018
Automated Process Approved PF02378 (PF02378 Phosphotransferase system, EIIC) Jul 2018
Automated Process Approved PF00367 (PF00367 phosphotransferase system, EIIB) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0015758 (DEPRECATED) glucose transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:1904659 glucose transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011299
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006464 cellular protein modification process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR018113, IPR004719, IPR001996, IPR036878
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005355 glucose transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Uncurated name ptsG Published Sequence Analysis - PubMed ID: 3023349
Reference: Escherichia coli K-12 		Mar 2008
Person Approved synonym CR Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym cat Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym car Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym gpt Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW1087 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym tgl Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved synonym glcA Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved synonym umgC Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym ECK1087 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym umg Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved locus tag b1101 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product PTS system glucose-specific IICB component Experimental - PubMed ID: 8089109
Reference: Escherichia coli K-12 		Mar 2008
Automated Process Approved alternate product name fused glucose-specific PTS enzymes: IIB component/IIC component Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name PTS family enzyme IIC (N-terminal); enzyme IIB (C-terminal), glucose-specific Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name PTS system, glucose-specific IIBC component Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR036878 Glucose permease domain IIB Protein Sequence Similarity - InterPro Domain: IPR036878
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF02378 Phosphotransferase system, EIIC Protein Sequence Similarity - PFAM Model Name: PF02378
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site Protein Sequence Similarity - InterPro Domain: IPR018113
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00367 phosphotransferase system, EIIB Protein Sequence Similarity - PFAM Model Name: PF00367
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR011299 PTS system glucose-specific IIBC component Protein Sequence Similarity - InterPro Domain: IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component Protein Sequence Similarity - InterPro Domain: IPR004719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001996 Phosphotransferase system, IIB component, type 1 Protein Sequence Similarity - InterPro Domain: IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011535 (DEPRECATED) Phosphotransferase system, glucose-like IIB component Protein Sequence Similarity - InterPro Domain: IPR011535
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR013013 Phosphotransferase system, EIIC component, type 1 Protein Sequence Similarity - InterPro Domain: IPR013013
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 2.7.1.69 Published Annotation - Swiss-Prot Accession Number: P69786 Feb 2006
Person Uncurated MultiFun 4.4.A.1 (transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Glucose-Glucoside (Glc) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 2.3.3 (information transfer; protein related; posttranslational modification) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.71 (transport; substrate; glucose) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 3.1.3.2 (regulation; type of regulation; posttranscriptional; covalent modification, demodification, maturation) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10787 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945651 Published Annotation - Entrez Gene Database ID: 945651
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P69786 Published Annotation - Swiss-Prot Accession Number: P69786 Jan 2006
Automated Process Approved db xref GI:1787343 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P69786 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0003722 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Carbohydrates, organic acids, alcohols Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note PTS system, glucose-specific IIBC component; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006464 - protein modification process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74185.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved regulation expression regulated by acetate; expression is reduced by acetate Experimental - PubMed ID: 11244055
Reference: Escherichia coli ATCC43888 (EHEC) 		Nov 2005
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0015758 (DEPRECATED) glucose transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006464 cellular protein modification process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:1904659 glucose transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011299
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR018113, IPR004719, IPR001996, IPR036878
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005355 glucose transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000561 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001666 ptsG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001752 ptsG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000329 ptsG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001886 ptsG CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000910 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002537 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129626 ptsG CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0105052 ptsG CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104467 ptsG CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001647 ptsG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002509 ptsG CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0001930 ptsG_3 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002414 ptsG_2 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0006334 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0017988 ptsG CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002497 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002204 ptsG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0300716 ptsG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001639 ptsG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002078 ptsG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003727 ptsG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009053 ptsG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001103 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005373 ptsG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001017 ptsG CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003276 ptsG CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008319 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009625 ptsG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009014 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0077476 ptsG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001195 ptsG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001428 ptsG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001267 ptsG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005665 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006394 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010197 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009227 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009989 ptsG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0006320 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010106 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010735 ptsG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0025540 ptsG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008184 ptsG_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005901 ptsG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001633 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001053 ptsG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001113 ptsG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001647 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001402 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001354 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001312 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175392 pseudogene
Automated Process Approved Go view Escherichia coli SE11 AFS-0001192 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002025 ptsG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0131426 ptsG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000379 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001231 CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002209 ptsG CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003232 ptsG CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001103 ptsG CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0004079 ptsG CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006254 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0000826 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004263 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0000860 ptsG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003323 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001549 ptsG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0002712 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009247 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003240 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0287004 CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004668 ptsG CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0062065 ptsG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001154 ptsG CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0000463 ptsG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002368 ptsG CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0007484 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006156 ptsG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001871 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001362 ptsG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006435 ptsG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006015 ptsG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005805 ptsG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008616 ptsG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005681 ptsG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007908 ptsG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008110 ptsG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007434 ptsG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004773 ptsG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005671 ptsG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008429 ptsG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001660 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0001648 ptsG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002331 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005851 ptsG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008674 ptsG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005367 ptsG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008273 ptsG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0107604 ptsG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083431 ptsG CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001379 ptsG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094157 ptsG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008245 ptsG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008468 ptsG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006284 ptsG CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0003924 ptsG CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0265189 ptsG CDS
Person Approved Go view Shigella boydii 227 ADV-0002178 ptsG CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007634 ptsG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006352 ptsG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002362 ptsG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072238 ptsG CDS
Person Approved Go view Shigella flexneri 301 ABT-0087449 ptsG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0001192 ptsG CDS
Person Approved Go view Shigella sonnei 046 ADD-0001207 ptsG CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002088 VC2013 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001661 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004974 glcA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003340 glcA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000054 ptsG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000033 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239654 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007611 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002320 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005063 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001888 ptsG CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120648 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004739 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005747 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000620 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009612 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008456 ptsG CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031460 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007686 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002438 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002208 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007949 ptsG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005553 ptsG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002550 ptsG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003045 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001990 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0011828 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004279 ptsG CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1152869 to 1164302
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0003705fabFCDSforward11519391153180Upstream
ABE-0003709pabCCDSforward11533001154109Upstream
ABE-0003712mltGCDSforward11541121155134Upstream
ABE-0003714tmkCDSforward11551241155765Upstream
ABE-0003716holBCDSforward11557621156766Upstream
ABE-0285714matS2protein_bindforward11562991156311Upstream
ABE-0003719ycfHCDSforward11567771157574Upstream
ABE-0003722ptsGCDSforward11578691159302Matches
ABE-0003724fhuECDScomplement11593621161551Downstream
ABE-0003729hinTCDSforward11618851162244Downstream
ABE-0003731ycfLCDSforward11622471162624Downstream
ABE-0003733lpoBCDSforward11626381163279Downstream
ABE-0003735thiKCDSforward11632601164084Downstream
ABE-0003737nagZCDSforward11640951165120Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.