Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0003984 (nhaB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0003984 showshow history
Names
nhaB JW1175 ECK1174 b1186
Product
sodium:proton antiporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1233176 1234717 1542 514
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004671 (IPR004671 Na+/H+ antiporter NhaB) Apr 2008
Automated Process Approved PF06450 (PF06450 Bacterial Na+/H+ antiporter B (NhaB)) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0009268 response to pH Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006814 sodium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0015385 sodium:proton antiporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nhaB Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW1175 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK1174 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b1186 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product sodium:proton antiporter Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name Na+/H+ antiporter, pH independent Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name sodium:proton antiporter, regulator of intracellular pH (NhaB family) Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Automated Process Approved protein family IPR004671 Na+/H+ antiporter NhaB Protein Sequence Similarity - InterPro Domain: IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF06450 Bacterial Na+/H+ antiporter B (NhaB) Protein Sequence Similarity - PFAM Model Name: PF06450
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 4.2.A.34 (transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The NhaB Na+:H+ Antiporter (NhaB) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 5.5.4 (cell processes; adaptation to stress; pH response) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.136 (transport; substrate; Na+/H+) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:944822 Published Annotation - Entrez Gene Database ID: 944822
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P0AFA7 Published Annotation - Swiss-Prot Accession Number: P0AFA7 Jan 2006
Automated Process Approved db xref GI:1787435 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AFA7 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11392 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0003984 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Cations Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note Na+/H+ antiporter, pH independent; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009268 - response to pH Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74270.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0009268 response to pH Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006814 sodium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015385 sodium:proton antiporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004671
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002735 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002102 nhaB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002140 nhaB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001619 nhaB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002161 nhaB CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002448 nhaB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001559 nhaB CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002562 nhaB CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0003225 nhaB CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003172 nhaB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003793 nhaB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006047 nhaB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001239 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009778 nhaB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001131 nhaB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0003163 nhaB CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0008245 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008955 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0077745 nhaB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001320 nhaB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001633 nhaB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009889 nhaB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010879 nhaB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001388 nhaB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005773 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004052 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010385 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009420 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009077 nhaB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0006513 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010372 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010302 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008496 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010491 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010646 nhaB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007986 nhaB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0025736 nhaB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005836 nhaB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005966 nhaB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001507 nhaB CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001112 nhaB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001202 nhaB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001578 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001475 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001423 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001442 nhaB CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175520 nhaB pseudogene
Automated Process Approved Go view Escherichia coli SE11 AFS-0001261 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001962 nhaB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0131632 nhaB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002426 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001376 nhaB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0001785 nhaB CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002667 nhaB CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002318 nhaB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0000415 nhaB CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006732 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009966 CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062626 nhaB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001455 nhaB CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000619 nhaB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003219 nhaB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0006808 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0142723 nhaB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005503 nhaB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001178 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002109 nhaB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005784 nhaB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0004014 nhaB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0003978 nhaB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004646 nhaB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006366 nhaB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005306 nhaB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005360 nhaB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008130 nhaB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005444 nhaB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006309 nhaB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004474 nhaB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001069 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001067 nhaB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001421 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006558 nhaB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0009128 nhaB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006032 nhaB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007107 nhaB CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108892 nhaB CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0082785 nhaB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002185 nhaB CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095877 nhaB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007521 nhaB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006873 nhaB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007420 nhaB CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0003027 nhaB CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0266496 nhaB CDS
Person Approved Go view Shigella boydii 227 ADV-0002092 nhaB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0006747 nhaB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0008378 nhaB CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0001395 nhaB CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072316 nhaB CDS
Person Approved Go view Shigella flexneri 301 ABT-0087515 nhaB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0001268 nhaB CDS
Person Approved Go view Shigella sonnei 046 ADD-0001269 nhaB CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0001975 VC1901 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0004549 nhaB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000585 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006704 nhaB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002677 nhaB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002488 nhaB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001505 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238941 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006477 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001818 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004634 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001304 nhaB CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0122308 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005569 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008028 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008728 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005838 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001943 nhaB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001180 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007629 nhaB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005971 nhaB CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002153 nhaB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002536 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002494 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0012402 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004131 nhaB CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20264mutantTn5 InsertionRequest the StrainABE-0003984nhaBnhaB::Tn5KAN-2 at position 496 in Plus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1228176 to 1239717
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0003957ycgMCDSforward12280791228738Downstream
ABE-0003960ycgNCDSforward12288151229276Downstream
ABE-0003962hlyECDScomplement12294831230394Downstream
ABE-0003974umuDCDSforward12307671231186Downstream
ABE-0003977umuCCDSforward12311861232454Downstream
ABE-0003979dsbBCDScomplement12325001233030Downstream
ABE-0003984nhaBCDScomplement12331761234717Matches
ABE-0003988fadRCDSforward12349381235657Upstream
ABE-0003990ycgBCDScomplement12357091237241Upstream
ABE-0003995dadACDSforward12375711238869Upstream
ABE-0003997dadXCDSforward12388791239949Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.