Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0004772 (tehB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0004772 showshow history
Names
tehB JW1426 ECK1423 b1430
Product
tellurite methyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1501562 1502155 594 198
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Uncurated ADX-0000570
EnteroFam0004772: Trusted threshold=425.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR004537 (IPR004537 Tellurite resistance methyltransferase, TehB) Apr 2008
Automated Process Approved IPR015985 (IPR015985 Tellurite resistance methyltransferase TehB-like domain) Jul 2018
Automated Process Approved IPR029063 (IPR029063 S-adenosyl-L-methionine-dependent methyltransferase) Jul 2018
Automated Process Approved PF03848 (PF03848 Tellurite resistance protein TehB) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0042493 response to drug Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0046690 response to tellurium ion GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name tehB Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK1423 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW1426 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b1430 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product tellurite methyltransferase Published Annotation - EcoCyc Accession Number: EG11884
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Automated Process Approved alternate product name tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved alternate product name predicted S-adenosyl-L-methionine-dependent methyltransferase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name putative methyltransferase; tellurite resistance Published Annotation - Database Name: GenProtEC Jan 2006
Person Uncurated alternate product name tellurite resistance protein Experimental - PubMed ID: 11032735
Reference: Escherichia coli 		Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0004772: Trusted threshold=425.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000570
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR015985 Tellurite resistance methyltransferase TehB-like domain Protein Sequence Similarity - InterPro Domain: IPR015985
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF03848 Tellurite resistance protein TehB Protein Sequence Similarity - PFAM Model Name: PF03848
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004537 Tellurite resistance methyltransferase, TehB Protein Sequence Similarity - InterPro Domain: IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Protein Sequence Similarity - InterPro Domain: IPR029063
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 5.6.4 (cell processes; protection; drug resistance/sensitivity) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11884 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1787700 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945979 Published Annotation - Entrez Gene Database ID: 945979
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P25397 Published Annotation - Swiss-Prot Accession Number: P25397 Jan 2005
Automated Process Approved db xref ASAP:ABE-0004772 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P25397 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved function enzyme; Drug/analog sensitivity Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note GO_process: GO:0042493 - response to drug Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74512.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0046690 response to tellurium ion GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0042493 response to drug Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004537
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000897 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001981 tehB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001782 tehB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001922 tehB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001767 tehB CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001978 tehB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002198 tehB CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002323 tehB CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0002989 tehB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008305 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0016795 tehB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000865 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002674 tehB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0303843 tehB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001094 tehB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004024 tehB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005432 tehB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001446 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010014 tehB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001414 tehB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002913 tehB CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007992 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005133 TehB CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0077971 tehB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001538 tehB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001858 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005317 tehB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006279 tehB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001686 tehB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006048 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001029 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005414 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009779 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009443 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007106 tehB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0006875 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009748 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0011350 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0011323 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008652 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007426 tehB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008596 tehB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026062 tehB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006053 tehB_2 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006189 tehB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001873 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001340 tehB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001468 tehB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001351 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001726 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001543 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001663 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175802 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001540 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001744 tehB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132003 tehB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002094 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001657 tehB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0001311 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002901 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001945 tehB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0000067 tehB CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002189 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003554 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002162 tehB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001846 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002914 tehB CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001227 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010648 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001037 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288036 tehB CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006019 hag1 CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061136 tehB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000499 tehB CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000222 tehB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000503 tehB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005382 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0145358 tehB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005728 tehB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001424 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001880 tehB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006005 tehB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0004733 tehB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0004619 tehB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004868 tehB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006148 tehB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005088 tehB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005139 tehB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004599 tehB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005220 tehB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006088 tehB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004695 tehB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001263 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001261 tehB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001684 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006335 tehB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005284 tehB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005809 tehB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005147 tehB CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108047 tehB CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0083231 tehB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001948 tehB CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095284 tehB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007749 tehB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005788 tehB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006977 tehB CDS
Person Approved Go view Shigella boydii 227 ADV-0001835 tehB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007067 tehB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007048 tehB CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002016 tehB CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072563 tehB CDS
Person Approved Go view Shigella flexneri 301 ABT-0088078 tehB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0001899 tehB CDS
Person Approved Go view Shigella sonnei 046 ADD-0001870 tehB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000390 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0007142 tehB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002894 tehB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000313 tehB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000092 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238361 tehB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006252 tehB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001616 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004432 tehB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001480 CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0121784 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005367 tehB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007460 tehB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000924 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009150 tehB CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032080 tehB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006041 tehB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001399 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007234 tehB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006106 tehB CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002027 tehB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002366 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002659 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0013272 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003925 tehB CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20322mutantTn5 InsertionRequest the StrainABE-0004772tehBtehB::Tn5KAN-2 at position 163 in Minus orientation ,+ pKD460Blattner Laboratory
FB20323mutantTn5 InsertionRequest the StrainABE-0004772tehBtehB::Tn5KAN-2 at position 163 in Minus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1496562 to 1507155
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0004750ydcJCDSforward14952881496631Upstream
ABE-0004754opgDCDSforward14968561498511Upstream
ABE-0004761ydcHCDSforward14986511498875Upstream
ABE-0004763rimLCDSforward14989381499477Upstream
ABE-0004765ydcKCDScomplement14994691500449Upstream
ABE-0285721matS9protein_bindforward15001091500121Upstream
ABE-0004770tehACDSforward15005731501565Overlaps Upstream
ABE-0004772tehBCDSforward15015621502155Matches
ABE-0004775ydcLCDSforward15024571503125Downstream
ABE-0285051yncK_2CDSpcomplement15031431503310Downstream
ABE-0285139IS609.1mobile_elementcomplement15031611504908Downstream
ABE-0285110yncKpseudogenecomplement15032181503649Downstream
ABE-0285052yncK_1CDSpcomplement15033621503649Downstream
ABE-0004778insQCDSforward15036571504865Downstream
ABE-0004780ydcOCDScomplement15049051506080Downstream
ABE-0285722matS10protein_bindforward15055151505527Downstream
ABE-0004783sutRCDSforward15061721506708Downstream
ABE-0004786rlhACDSforward15067811508742Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.