Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0004882 (nhoA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0004882 showshow history
Names
nhoA yddI JW1458 ECK1457 b1463
Product
N-hydroxyarylamine O-acetyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1534024 1534869 846 282
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001447 (IPR001447 Arylamine N-acetyltransferase) Apr 2008
Automated Process Approved IPR004081 (IPR004081 (DEPRECATED) Arylamine N-acetyltransferase) Apr 2008
Automated Process Approved IPR038765 (IPR038765 Papain-like cysteine peptidase superfamily) Jul 2018
Automated Process Approved PF00797 (PF00797 N-acetyltransferase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001447
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO biological process GO:0008152 metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0004060 arylamine N-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004081
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001447
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nhoA Published Annotation - Swiss-Prot Accession Number: P77567 Aug 2002
Person Approved synonym ECK1457 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym yddI Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym JW1458 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b1463 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product N-hydroxyarylamine O-acetyltransferase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name N-hydroxyarylamine O-acetyltransferase Published Annotation - Swiss-Prot Accession Number: P77567 Jan 2006
Protein Family
Automated Process Approved protein family IPR004081 (DEPRECATED) Arylamine N-acetyltransferase Protein Sequence Similarity - InterPro Domain: IPR004081
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001447 Arylamine N-acetyltransferase Protein Sequence Similarity - InterPro Domain: IPR001447
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00797 N-acetyltransferase Protein Sequence Similarity - PFAM Model Name: PF00797
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR038765 Papain-like cysteine peptidase superfamily Protein Sequence Similarity - InterPro Domain: IPR038765
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 2.3.1.118 Published Annotation - Swiss-Prot Accession Number: P77567 Feb 2006
Automated Process Uncurated EC number 2.3.1.- Published Annotation - Database Name: EC2GO: GO:0016407
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 1 (metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13780 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0004882 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:947251 Published Annotation - Entrez Gene Database ID: 947251
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1787736 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P77567 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P77567 Published Annotation - Swiss-Prot Accession Number: P77567 Jan 2006
Automated Process Approved note GO_process: GO:0008152 - metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74545.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001447
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO biological process GO:0008152 metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0004060 arylamine N-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004081
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001447
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003663 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0003211 nhoA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002940 nhoA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002895 nhoA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002761 nhoA CDS
Ortholog
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002284 nhoA CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002943 nhoA CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0020046 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002818 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003994 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005469 CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001477 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010061 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001438 nhoA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002879 CDS
Person Approved Go view Escherichia coli ATCC 8739 AEM-0007948 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005096 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078013 nhoA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001633 nhoA CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0001896 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005273 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007957 CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001713 nhoA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006084 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003330 CDS
Person Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010925 nhoA pseudogene
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0285372 nhoA pseudogene
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007984 nhoA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006224 CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001919 CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0001372 nhoA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001504 nhoA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001783 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0001737 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001701 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175834 CDS
Person Approved Go view Escherichia coli SE11 AFS-0001581 CDS
Person Approved Go view Escherichia coli SMS-3-5 AFT-0001710 CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132036 nhoA pseudogene
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002055 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001688 nhoA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001889 nhoA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0004665 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005754 CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006031 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0004800 nhoA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0004684 nhoA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004893 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006122 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005062 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005112 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004572 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005194 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006063 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004721 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001289 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001286 nhoA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001721 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006310 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005311 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005783 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005121 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108089 CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0083206 CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001912 nhoA CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095210 nhoA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007775 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005763 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007119 CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0001907 nhoA pseudogene
Person Approved Go view Shigella sonnei 046 ADD-0001809 nhoA CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0013418 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003882 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB22172mutantTn5 InsertionRequest the StrainABE-0004882nhoAb1463::Tn5KAN-I-SceI at position 802 in Plus orientation ,+ pKD460Blattner Laboratory
FB23105mutantTn5 InsertionRequest the StrainABE-0004882nhoAb1463::Tn5KAN-I-SceI at position 802 in Plus orientation ,- pKD465Tim Durfee (durf@genome.wisc.edu)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1529024 to 1539869
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0004858rhsEpseudogeneforward15279021529938Upstream
ABE-0004861ydcDCDSforward15299221530404Upstream
ABE-0285795yncOCDScomplement15303191530504Upstream
ABE-0004865yncI_1CDSpforward15305861531332Upstream
ABE-0285123yncIpseudogeneforward15305861531673Upstream
ABE-0004868yncI_2CDSpforward15313761531576Upstream
ABE-0285153is_elementforward15316721532962Upstream
ABE-0004872ydcCCDSforward15318161532952Upstream
ABE-0004875pptACDSforward15330521533285Upstream
ABE-0004877yddHCDScomplement15332821533851Upstream
ABE-0004882nhoACDSforward15340241534869Matches
ABE-0285451repeat_regionforward15348831534957Downstream
ABE-0004886yddECDScomplement15349651535858Downstream
ABE-0004889narVCDScomplement15359371536617Downstream
ABE-0004892narWCDScomplement15366141537309Downstream
ABE-0285724matS12protein_bindforward15368071536819Downstream
ABE-0004896narYCDScomplement15373091538853Downstream
ABE-0004898narZCDScomplement15388501542590Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.