Alignments
Protein Domains
ASAP ID
Names
narZ
chlZ
JW1463
ECK1462
b1468
Product
nitrate reductase Z subunit alpha
Type
CDS
Location
#
Contig
Strand
Left
Right
Length (b.p.)
Length (a.a.)
1
Chromosome
complement
1538850
1542590
3741
1247
Sequence
Context
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Protein Families
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Family
Annotated
IPR006656 (IPR006656 Molybdopterin oxidoreductase)
Apr 2008
IPR006657 (IPR006657 Molybdopterin dinucleotide-binding domain)
Apr 2008
IPR006655 (IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site)
Apr 2008
IPR009010 (IPR009010 Aspartate decarboxylase-like domain superfamily)
Apr 2008
IPR006468 (IPR006468 Nitrate reductase, alpha subunit)
Apr 2008
IPR028189 (IPR028189 Nitrate reductase, alpha subunit, N-terminal)
Jul 2018
IPR006963 (IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain)
Jul 2018
PF00384 (PF00384 Molybdopterin oxidoreductase)
Jul 2018
PF01568 (PF01568 Molydopterin dinucleotide binding domain)
Jul 2018
PF14710 (PF14710 Respiratory nitrate reductase alpha N-terminal)
Jul 2018
Gene Ontology
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Annotations
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Type
Annotation
Evidence
Annotated
name
narZ
Published Annotation -
GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Oct 1998
synonym
JW1463
Published Annotation -
PubMed ID: 16397293
Jan 2006
synonym
ECK1462
Published Annotation -
PubMed ID: 16397293
Jan 2006
synonym
chlZ
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
locus tag
b1468
Unique Identifier -
Origin: Guy Plunkett III, guy@genome.wisc.edu
May 2004
product
nitrate reductase Z subunit alpha
Published Annotation -
EcoCyc Accession Number: EG10648
Reference: Escherichia coli K-12 MG1655
Oct 2021
alternate product name
nitrate reductase 2 (NRZ), alpha subunit
Published Annotation -
PubMed ID: 16397293
Jan 2006
alternate product name
cryptic nitrate reductase 2 alpha subunit
Published Annotation -
Swiss-Prot Accession Number: P19319
Jan 2006
alternate product name
nitrate reductase 2, alpha subunit
Published Annotation -
Database Name: GenProtEC
Jan 2006
protein family
IPR006656 Molybdopterin oxidoreductase
Protein Sequence Similarity -
InterPro Domain: IPR006656
Reference: Escherichia coli K-12 MG1655
Apr 2008
protein family
IPR006657 Molybdopterin dinucleotide-binding domain
Protein Sequence Similarity -
InterPro Domain: IPR006657
Reference: Escherichia coli K-12 MG1655
Apr 2008
protein family
PF00384 Molybdopterin oxidoreductase
Protein Sequence Similarity -
PFAM Model Name: PF00384
Reference: Escherichia coli K-12 MG1655
Jul 2018
protein family
PF01568 Molydopterin dinucleotide binding domain
Protein Sequence Similarity -
PFAM Model Name: PF01568
Reference: Escherichia coli K-12 MG1655
Jul 2018
protein family
PF14710 Respiratory nitrate reductase alpha N-terminal
Protein Sequence Similarity -
PFAM Model Name: PF14710
Reference: Escherichia coli K-12 MG1655
Jul 2018
protein family
IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain
Protein Sequence Similarity -
InterPro Domain: IPR006963
Reference: Escherichia coli K-12 MG1655
Jul 2018
protein family
IPR028189 Nitrate reductase, alpha subunit, N-terminal
Protein Sequence Similarity -
InterPro Domain: IPR028189
Reference: Escherichia coli K-12 MG1655
Jul 2018
protein family
IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site
Protein Sequence Similarity -
InterPro Domain: IPR006655
Reference: Escherichia coli K-12 MG1655
Apr 2008
protein family
IPR009010 Aspartate decarboxylase-like domain superfamily
Protein Sequence Similarity -
InterPro Domain: IPR009010
Reference: Escherichia coli K-12 MG1655
Apr 2008
protein family
IPR006468 Nitrate reductase, alpha subunit
Protein Sequence Similarity -
InterPro Domain: IPR006468
Reference: Escherichia coli K-12 MG1655
Apr 2008
EC number
1.-.-.-
Published Annotation -
Database Name: EC2GO: GO:0016491 Reference: Escherichia coli K-12 MG1655
Jul 2018
EC number
1.7.99.4
Published Annotation -
Swiss-Prot Accession Number: P19319
Feb 2006
MultiFun
6.1
(cell structure; membrane )
Published Annotation -
MultiFun Database Name: MultiFun
Feb 2002
MultiFun
7.3
(location of gene products; inner membrane )
Published Annotation -
MultiFun Database Name: MultiFun
Feb 2002
MultiFun
1.4.2
(metabolism; energy production/transport; electron acceptor )
Published Annotation -
MultiFun Database Name: MultiFun
Feb 2002
MultiFun
1.3.7
(metabolism; energy metabolism, carbon; anaerobic respiration )
Published Annotation -
MultiFun Database Name: MultiFun
Feb 2002
codon start
1
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
db xref
UniProtKB/Swiss-Prot:P19319
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
db xref
GeneID:945999
Published Annotation -
Entrez Gene Database ID: 945999
Reference: Escherichia coli K-12 MG1655
Jun 2009
db xref
GI:1787741
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
db xref
ASAP:ABE-0004898
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
db xref
EcoGene:EG10648
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
db xref
UniProtKB:P19319
Published Annotation -
Swiss-Prot Accession Number: P19319
Jan 2005
function
enzyme; Energy metabolism, carbon: Anaerobic respiration
Published Annotation -
GenBank Accession Number: U00096
Reference: Escherichia coli MG1655
Oct 1998
note
GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
protein id
AAC74550.1
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
subcellular localization
Cytoplasmic
Predicted by PSORTb -
PSORTb Final_Score: 8.96 Reference: Escherichia coli K-12 MG1655
Feb 2008
subsystem
component of in silico model iAF1260
Experimental -
PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655
Jan 2009
transl table
11
Published Annotation -
GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655
Oct 2013
GO biological process
GO:0009061 anaerobic respiration
Ontology Mapping -
Source and Dest Ontology: MultiFun to GO
Mar 2004
GO biological process
GO:0042126 nitrate metabolic process
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006468 Reference: Escherichia coli K-12 MG1655
Apr 2008
GO biological process
GO:0055114 (OBSOLETE) oxidation-reduction process
GO Inferred from Electronic Annotation -
Database Name:Identifier: InterPro2GO: IPR006656, IPR006657, IPR006468, IPR006963 Reference: Escherichia coli K-12 MG1655
Jul 2018
GO biological process
GO:0006118 (OBSOLETE) electron transport
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006655 Reference: Escherichia coli K-12 MG1655
Apr 2008
GO cellular component
GO:0009325 nitrate reductase complex
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006468 Reference: Escherichia coli K-12 MG1655
Apr 2008
GO cellular component
GO:0019866 organelle inner membrane
Ontology Mapping -
Source and Dest Ontology: MultiFun to GO
Mar 2004
GO cellular component
GO:0005737 cytoplasm
GO Inferred from Electronic Annotation -
PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655
Feb 2008
GO molecular function
GO:0009054 (DEPRECATED) electron acceptor activity
Ontology Mapping -
Source and Dest Ontology: MultiFun to GO
Mar 2004
GO molecular function
GO:0043546 molybdopterin cofactor binding
GO Inferred from Electronic Annotation -
Database Name:Identifier: InterPro2GO: IPR006657 Reference: Escherichia coli K-12 MG1655
Jul 2018
GO molecular function
GO:0008940 nitrate reductase activity
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006468 Reference: Escherichia coli K-12 MG1655
Apr 2008
GO molecular function
GO:0030151 molybdenum ion binding
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006657 Reference: Escherichia coli K-12 MG1655
Apr 2008
GO molecular function
GO:0016491 oxidoreductase activity
GO Inferred from Electronic Annotation -
Database Name:Identifier: INTERPRO:IPR006656 Reference: Escherichia coli K-12 MG1655
Apr 2008
Comparative
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Experimental
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Strains
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Strains with mutations in this feature.
Strain Name Strain Type Strain Information Strain Request FeatureID Name Mutation Details Experiments Using Strain Submitter FB20326 mutant Tn5 Insertion Request the Strain ABE-0004898 narZ narZ::Tn5KAN-2 at position 2321 in Minus orientation ,- pKD46 0 Blattner Laboratory
FB20327 mutant Tn5 Insertion Request the Strain ABE-0004898 narZ narZ::Tn5KAN-2 at position 2322 in Minus orientation ,+ pKD46 0 Blattner Laboratory
Context Table
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Listed below are features that lie nearby this feature.
Features encoded in multiple intervals may
appear more than once in the table. Features that span the origin
will have a left endpoint greater than the right endpoint.
Features overlapping the region 1533850 to 1547590
FeatureID Name Feature Type Strand Left End Right End Relationship ABE-0000001 source forward 1 4641652 Contains
ABE-0004877 yddH CDS complement 1533282 1533851 Downstream
ABE-0004882 nhoA CDS forward 1534024 1534869 Downstream
ABE-0285451 repeat_region forward 1534883 1534957 Downstream
ABE-0004886 yddE CDS complement 1534965 1535858 Downstream
ABE-0004889 narV CDS complement 1535937 1536617 Downstream
ABE-0004892 narW CDS complement 1536614 1537309 Downstream
ABE-0285724 matS12 protein_bind forward 1536807 1536819 Downstream
ABE-0004896 narY CDS complement 1537309 1538853 Overlaps Downstream
ABE-0004898 narZ CDS complement 1538850 1542590 Matches
ABE-0285452 repeat_region forward 1542634 1542662 Upstream
ABE-0004901 narU CDS complement 1542672 1544060 Upstream
ABE-0004904 yddJ pseudogene complement 1544384 1545438 Upstream
ABE-0004906 yddK pseudogene complement 1545428 1545753 Upstream
ABE-0004910 yddL pseudogene complement 1545751 1546028 Upstream
ABE-0004912 yddG CDS complement 1546288 1547169 Upstream
ABE-0004917 fdnG CDS forward 1547401 1550448 Upstream
Links download
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Release Notes
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All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.