Escherichia coli K-12 MG1655
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0005286 (speG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0005286 showshow history
Names
speG JW1576 ECK1579 b1584
Product
spermidine N1-acetyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1656184 1656744 561 187
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000182 (IPR000182 GNAT domain) Apr 2008
Automated Process Approved IPR016181 (IPR016181 Acyl-CoA N-acyltransferase) Jul 2018
Automated Process Approved PF13302 (PF13302 Acetyltransferase (GNAT) domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006596 polyamine biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0008080 N-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name speG Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK1579 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW1576 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b1584 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product spermidine N1-acetyltransferase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name spermidine N1-acetyltransferase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR016181 Acyl-CoA N-acyltransferase Protein Sequence Similarity - InterPro Domain: IPR016181
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000182 GNAT domain Protein Sequence Similarity - InterPro Domain: IPR000182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF13302 Acetyltransferase (GNAT) domain Protein Sequence Similarity - PFAM Model Name: PF13302
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 2.3.1.57 Published Annotation - Swiss-Prot Accession Number: P0A951 Feb 2006
Person Uncurated MultiFun 1.7.14 (metabolism; central intermediary metabolism; polyamine biosynthesis) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0005286 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12447 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1787867 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0A951 Published Annotation - Swiss-Prot Accession Number: P0A951 Jan 2006
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0A951 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946117 Published Annotation - Entrez Gene Database ID: 946117
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved function enzyme; Central intermediary metabolism: Polyamine biosynthesis Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note GO_process: GO:0006596 - polyamine biosynthetic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74656.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006596 polyamine biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0008080 N-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000182
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002693 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001892 speG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001685 speG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000237 speG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001799 speG CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002316 speG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001818 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002202 speG_3 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002849 speG_2 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007989 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0017317 speG CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001141 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002529 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0304306 speG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002904 speG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000987 speG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003923 speG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005613 speG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001544 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010150 speG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001507 CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002804 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007779 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005420 speG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006056 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078089 speG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001786 speG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002061 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005105 speG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010841 speG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001782 speG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006228 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001763 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005672 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009980 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009925 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008708 speG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007133 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008414 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010975 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009405 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0011050 speG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009276 speG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008556 speG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009683 speG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026371 speG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009623 speG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006332 speG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0001927 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001486 speG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001626 speG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0001945 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0001949 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002332 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001779 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0175925 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001734 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001615 speG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132271 speG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004296 CDS
Person Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001778 speG CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002590 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003804 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001587 speG CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002282 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003270 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002299 speG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001702 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0003064 speG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001090 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010754 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0000882 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0291356 speG CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006110 speG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0004089 CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0002633 speG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001122 CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005802 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0143185 speG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005844 speG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001492 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001769 speG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006107 speG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005035 speG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0004892 speG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004977 speG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006035 speG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004971 speG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005019 speG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004482 speG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005102 speG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005980 speG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004807 speG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001362 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0001353 speG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001820 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006223 speG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005401 speG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005691 speG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005023 speG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108224 speG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0083137 speG CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001816 speG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094990 speG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007863 speG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005679 speG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008537 speG CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002168 CDS
Person Uncurated Go view Shigella boydii 227 ADV-0001714 speG pseudogene
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004229 speG CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0001816 speG pseudogene
Person Approved Go view Shigella flexneri 2457T ABQ-0072814 speG pseudogene
Person Approved Go view Shigella flexneri 301 ABT-0087908 speG pseudogene
Person Approved Go view Vibrio cholerae N16961 ADH-0003840 VCA0947 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0004786 speG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000790 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003370 speG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001497 speG_2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002522 speG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003691 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240818 speG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007237 speG CDS
Person Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002736 speG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006329 speG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000669 speG CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124786 speG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004316 speG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006090 speG CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002465 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006363 speG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005731 speG CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031080 speG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007192 speG CDS
Person Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001575 speG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002616 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005536 speG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005191 speG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002892 speG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003471 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001572 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0013625 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003824 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB23523mutantTn5 InsertionRequest the StrainABE-0005286speGspeG::Tn5KAN-2 at position 66 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1651184 to 1661744
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0234209Qin (Kim)prophageforward16322861652754Upstream
ABE-0285457cryptic prophage Qin/Kimmisc_featurecomplement16322861652743Upstream
ABE-0005266is_elementcomplement16508431651548Upstream
ABE-0285458mobile_elementforward16508431651548Upstream
ABE-0005268insD-7pseudogeneforward16508451651537Upstream
ABE-0005270intQpseudogeneforward16515491652708Upstream
ABE-0285055ydfJ_1CDSpcomplement16527281652838Upstream
ABE-0285155ydfJpseudogenecomplement16527461652838(Interval #1) Upstream
ABE-0005272rspBCDScomplement16528961653915Upstream
ABE-0005275rspACDScomplement16539271655141Upstream
ABE-0005279ynfACDScomplement16553471655673Upstream
ABE-0005284ynfBCDSforward16558081656149Upstream
ABE-0005286speGCDSforward16561841656744Matches
ABE-0005288ynfCCDScomplement16567471657457Downstream
ABE-0005297ynfDCDSforward16575651657870Downstream
ABE-0285459repeat_regionforward16578881657908Downstream
ABE-0005302ynfECDSforward16580691660495Downstream
ABE-0005307ynfFCDSforward16605561662979Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.