Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0005617 (sufD) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0005617 showshow history
Names
sufD JW1671 ECK1677 ynhC b1681
Product
Fe-S cluster scaffold complex subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1760520 1761791 1272 424
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000618
EnteroFam0005617: Trusted threshold=1088.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR000825 (IPR000825 SUF system FeS cluster assembly, SufBD) Apr 2008
Automated Process Approved IPR011542 (IPR011542 SUF system FeS cluster assembly, SufD) Apr 2008
Automated Process Approved IPR037284 (IPR037284 SUF system FeS cluster assembly, SufBD superfamily) Jul 2018
Automated Process Approved PF01458 (PF01458 SUF system FeS cluster assembly, SufBD) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0016226 iron-sulfur cluster assembly GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000825, IPR011542
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name sufD Experimental - PubMed ID: 10322040
Reference: Escherichia coli 		Aug 2002
Person Approved synonym JW1671 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK1677 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ynhC Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved locus tag b1681 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product Fe-S cluster scaffold complex subunit Published Annotation - EcoCyc Accession Number: G6907
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Uncurated alternate product name required for stability of the [2Fe-2S] FhuF protein Experimental - PubMed ID: 10322040
Reference: Escherichia coli 		Jan 2006
Person Uncurated alternate product name required for stability of iron-sulfur component of FhuF Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name component of SufBCD complex Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved alternate product name component of SufBCD Fe-S cluster assembly scaffold Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0005617: Trusted threshold=1088.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000618
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR037284 SUF system FeS cluster assembly, SufBD superfamily Protein Sequence Similarity - InterPro Domain: IPR037284
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01458 SUF system FeS cluster assembly, SufBD Protein Sequence Similarity - PFAM Model Name: PF01458
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000825 SUF system FeS cluster assembly, SufBD Protein Sequence Similarity - InterPro Domain: IPR000825
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011542 SUF system FeS cluster assembly, SufD Protein Sequence Similarity - InterPro Domain: IPR011542
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 1.7.19 (metabolism; central intermediary metabolism; incorporation of metal ions) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0005617 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P77689 Published Annotation - Swiss-Prot Accession Number: P77689 Jan 2005
Automated Process Approved db xref GeneID:944878 Published Annotation - Entrez Gene Database ID: 944878
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1787971 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P77689 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13963 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated molecular interaction Interacts with the product of sufB ASAP:5621:(interacting residues not known); by MALDI-TOF Experimental - PubMed ID: 15690043
Reference: Escherichia coli K-12 W3110 		Mar 2005
Automated Process Approved protein id AAC74751.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0016226 iron-sulfur cluster assembly GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000825, IPR011542
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000618 sufD CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002107 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001652 sufD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001549 sufD CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000539 sufD CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001874 sufD CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001798 sufD CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002307 sufD CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002090 sufD CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0002690 sufD CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0006414 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0020087 sufD CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002366 sufD CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0301265 sufD CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001844 sufD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001880 sufD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004230 sufD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007726 sufD CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001640 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010252 sufD CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001598 sufD CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002707 sufD CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007654 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009255 sufD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008181 SufD CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078194 sufD CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001891 sufD CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002171 sufD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007415 sufD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009071 sufD CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001883 sufD CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006334 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006190 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005778 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010082 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008642 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010021 sufD CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007235 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007663 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010872 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008619 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009871 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007834 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007850 sufD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010076 sufD CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026470 sufD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0010381 sufD CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006437 sufD CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002083 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001579 sufD CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001724 sufD CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002393 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002039 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002228 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001884 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001835 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001514 sufD CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132371 sufD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004191 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001880 sufD CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002055 sufD CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002144 sufD CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0004269 sufD CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001078 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004021 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001087 sufD CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003044 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001777 sufD CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0002447 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009425 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0002495 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289808 sufD CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004919 sufD CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0062121 sufD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001022 sufD CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003798 sufD CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002420 sufD CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0007429 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0142858 sufD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005973 sufD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001677 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001621 sufD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006239 sufD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005464 sufD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005283 sufD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008180 sufD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005868 sufD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004842 sufD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004882 sufD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007856 sufD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004971 sufD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005852 sufD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004937 sufD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001969 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006095 sufD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006889 sufD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005557 sufD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008420 sufD CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108562 sufD CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082954 sufD CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001668 sufD CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094647 sufD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007995 sufD CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008404 sufD CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008454 sufD CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0003606 sufD CDS
Person Approved Go view Shigella boydii 227 ADV-0001603 ynhC CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007291 sufD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007693 sufD CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002206 ynhC CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072934 sufD CDS
Person Approved Go view Shigella flexneri 301 ABT-0088016 sufD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001814 ynhC CDS
Person Approved Go view Shigella sonnei 046 ADD-0001602 sufD CDS
Person Uncurated Go view Wigglesworthia morsitans AEQ-0000532 sufD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000558 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006369 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000895 sufD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001479 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239521 sufD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006705 sufD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002113 sufD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004891 sufD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001061 CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123263 sufD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008324 sufD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007758 sufD CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008874 sufD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006141 sufD CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031634 sufD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008051 sufD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002238 sufD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000884 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006968 sufD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005711 sufD CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002398 sufD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002844 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002177 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0014375 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003622 sufD CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21937mutantTn5 InsertionRequest the StrainABE-0005617sufDynhC::Tn5KAN-2 at position 762 in Plus orientation ,+ pKD460Blattner Laboratory
FB23475mutantTn5 InsertionRequest the StrainABE-0005617sufDynhC::Tn5KAN-2 at position 762 in Plus orientation ,- pKD46 RESEQD By acciden5Tim Durfee (durf@genome.wisc.edu)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1755520 to 1766791
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0285853ynhHCDSforward17554961755690Downstream
ABE-0005600pykFCDSforward17556981757110Downstream
ABE-0005603lppCDSforward17574211757657Downstream
ABE-0005605ldtECDScomplement17577211758725Downstream
ABE-0005608sufECDScomplement17588741759290Downstream
ABE-0005610sufSCDScomplement17593031760523Overlaps Downstream
ABE-0005617sufDCDScomplement17605201761791Matches
ABE-0005619sufCCDScomplement17617661762512Overlaps Upstream
ABE-0005621sufBCDScomplement17625221764009Upstream
ABE-0005624sufACDScomplement17640181764386Upstream
ABE-0047250rydBncRNAcomplement17647131764780Upstream
ABE-0005626ydiHCDScomplement17649341765122Upstream
ABE-0285732matS20protein_bindforward17652131765225Upstream
ABE-0005628menICDScomplement17652221765632Upstream
ABE-0005632ydiJCDScomplement17656291768685Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.