Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0005628 (menI) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0005628 showshow history
Names
menI ydiI JW1676 ECK1683 b1686
Product
1,4-dihydroxy-2-naphthoyl-CoA hydrolase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1765222 1765632 411 137
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000622
EnteroFam0005628: Trusted threshold=314.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR003736 (IPR003736 Phenylacetic acid degradation-related domain) Apr 2008
Automated Process Approved IPR006683 (IPR006683 Thioesterase domain) Apr 2008
Automated Process Approved IPR029069 (IPR029069 HotDog domain superfamily) Jul 2018
Automated Process Approved PF03061 (PF03061 Thioesterase superfamily) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006683
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Uncurated name menI Published Annotation - PubMed ID: 23564174
Reference: Escherichia coli K-12 BW25113 		Jul 2018
Person Approved synonym ECK1683 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym ydiI Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym JW1676 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b1686 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product 1,4-dihydroxy-2-naphthoyl-CoA hydrolase Experimental - PubMed ID: 23564174
Reference: Escherichia coli K-12 BW25113 		Jul 2018
Person Uncurated alternate product name esterase Experimental - PubMed ID: 15808744
Reference: Escherichia coli K-12 		Jul 2018
Protein Family
Person Approved EnteroFam EnteroFam0005628: Trusted threshold=314.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000622
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR003736 Phenylacetic acid degradation-related domain Protein Sequence Similarity - InterPro Domain: IPR003736
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006683 Thioesterase domain Protein Sequence Similarity - InterPro Domain: IPR006683
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF03061 Thioesterase superfamily Protein Sequence Similarity - PFAM Model Name: PF03061
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR029069 HotDog domain superfamily Protein Sequence Similarity - InterPro Domain: IPR029069
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 3.1.-.- Published Annotation - Swiss-Prot Accession Number: P77781 Feb 2006
Automated Process Approved EC number 3.1.2.28 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13968 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1787976 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946190 Published Annotation - Entrez Gene Database ID: 946190
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P77781 Published Annotation - Swiss-Prot Accession Number: P77781 Jan 2006
Automated Process Approved db xref UniProtKB/Swiss-Prot:P77781 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0005628 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved function Enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74756.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006683
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000622 menI CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000537 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001748 ydiI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001807 menI CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000822 ydiI CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001719 menI CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0001329 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002495 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001784 ydiI CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002316 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002082 ydiI CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0002682 ydiI CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0006409 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0014494 menI CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002436 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002347 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004236 ydiL CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007732 ydiL CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001645 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010258 ydiL CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001603 ydiI CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002702 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007649 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009249 ydiL CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008175 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078199 ydiI CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001896 ydiI CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002176 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007409 ydiL CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009077 ydiL CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001889 ydiI CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006339 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006195 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005784 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010088 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008648 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010015 ydiL CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007241 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007657 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010866 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008625 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009877 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007828 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007844 ydiL CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010082 ydiL CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026475 ydiI CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006780 menI CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006443 ydiL CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002088 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001584 ydiI CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001730 ydiI CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002388 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002044 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002223 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001889 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176047 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001840 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001509 ydiL CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132376 ydiI CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004186 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001885 ydiI CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002060 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002841 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002163 ydiI CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0004264 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0006334 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0062116 ydiI CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001018 CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0001676 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002415 ydiI CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0007434 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0142870 CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0002260 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005980 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001684 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001615 ydiI CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006246 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005480 CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005298 CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008187 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005861 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004835 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004875 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007849 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004964 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005845 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004944 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001499 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001489 CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001976 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006088 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006896 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005550 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008413 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108578 ydiI CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082948 ydiI CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001662 CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094629 ydiI CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008002 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008397 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008447 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0003611 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0264623 CDS
Person Approved Go view Shigella boydii 227 ADV-0001598 CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007297 ydiL CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007687 ydiL CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0001932 CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0072939 ydiI CDS
Person Approved Go view Shigella flexneri 301 ABT-0088021 CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0001819 CDS
Person Approved Go view Shigella sonnei 046 ADD-0001597 ydiI CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003470 VCA0580 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0003315 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000562 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006380 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000891 ydiI CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000222 ydiI CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001483 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239527 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006709 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002117 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004895 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001056 CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123277 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008320 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007763 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008878 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006145 ydiI CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031630 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008046 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002242 ydiI CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000880 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006963 ydiI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005707 ydiI CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002402 ydiI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002848 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002173 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0014412 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003611 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21942mutantTn5 InsertionRequest the StrainABE-0005628menIb1686::Tn5KAN-2 at position 145 in Minus orientation ,+ pKD460Blattner Laboratory
FB22926mutantTn5 InsertionRequest the StrainABE-0005628menIb1686::Tn5(KAN-2) at position 145 in Minus orientation ,+ pKD46 0Blattner Laboratory
FB23479mutantTn5 InsertionRequest the StrainABE-0005628menIb1686::Tn5KAN-2 at position 145 in Minus orientation ,- pKD465Tim Durfee (durf@genome.wisc.edu)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1760222 to 1770632
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0005610sufSCDScomplement17593031760523Downstream
ABE-0005617sufDCDScomplement17605201761791Downstream
ABE-0005619sufCCDScomplement17617661762512Downstream
ABE-0005621sufBCDScomplement17625221764009Downstream
ABE-0005624sufACDScomplement17640181764386Downstream
ABE-0047250rydBncRNAcomplement17647131764780Downstream
ABE-0005626ydiHCDScomplement17649341765122Downstream
ABE-0285732matS20protein_bindforward17652131765225Overlaps Downstream
ABE-0005628menICDScomplement17652221765632Matches
ABE-0005632ydiJCDScomplement17656291768685Overlaps Upstream
ABE-0005637ydiKCDSforward17690741770186Upstream
ABE-0047251rprAncRNAforward17703721770477Upstream
ABE-0005641ydiLCDSforward17706151770971Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.