Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0005795 (chbC) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0005795 showshow history
Names
chbC JW1726 ECK1735 celB b1737
Product
PTS system N,N'-diacetylchitobiose-specific IIC component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1819856 1821214 1359 453
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004501 (IPR004501 Phosphotransferase system, EIIC component, type 3) Apr 2008
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Apr 2008
Automated Process Approved IPR004796 (IPR004796 Phosphotransferase system, cellobiose-type IIC component) Apr 2008
Automated Process Approved PF02378 (PF02378 Phosphotransferase system, EIIC) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name chbC Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym ECK1735 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW1726 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym celB Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved locus tag b1737 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product PTS system N,N'-diacetylchitobiose-specific IIC component Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name PTS family enzyme IIC, cellobiose/arbutin/salicin sugar-specific Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Automated Process Approved protein family IPR004501 Phosphotransferase system, EIIC component, type 3 Protein Sequence Similarity - InterPro Domain: IPR004501
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR004796 Phosphotransferase system, cellobiose-type IIC component Protein Sequence Similarity - InterPro Domain: IPR004796
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF02378 Phosphotransferase system, EIIC Protein Sequence Similarity - PFAM Model Name: PF02378
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 2.7.1.69 Protein Sequence Similarity - InterPro Domain: IPR004501
Reference: Escherichia coli K-12 MG1655 		Dec 2008
Person Uncurated MultiFun 4.4.A.3 (transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Lactose-N,N'-Diacetylchitobiose-betaucoside (Lac) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.29 (transport; substrate; cellobiose/arbutin/salicin) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0005795 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:945982 Published Annotation - Entrez Gene Database ID: 945982
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P17334 Published Annotation - Swiss-Prot Accession Number: P17334 Jan 2005
Automated Process Approved db xref GI:1788032 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P17334 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10141 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74807.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR004796, IPR004501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003029 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002320 chbC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002520 chbC CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0003142 chbC CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002595 chbC CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001554 chbC CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002592 celB CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002030 chbC CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0002621 chbC CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0002295 celB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004298 chbC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007787 chbC CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001695 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010314 chbC CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001647 celB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002653 chbC CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007594 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008147 chbC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009517 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078255 chbC CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001951 celB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002278 celB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007331 chbC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009698 chbC CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001985 chbC CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006395 chbC CDS
Automated Process Approved Go view Escherichia coli EC4024 (EHEC) BBI-0006249 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005839 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010142 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008702 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007559 chbC CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007295 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007603 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010812 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008679 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009932 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007774 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007790 chbC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008447 chbC CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026525 chbC CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006727 chbC CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006494 chbC CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002142 CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0001633 chbC CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001784 chbC CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002333 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002168 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001944 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176100 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001938 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001453 chbC CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132426 chbC CDS
Automated Process Approved Go view Escherichia coli TW14588 (EHEC) BBK-0004134 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001937 celB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000165 chbC CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0000613 chbC CDS
Person Approved Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001235 celB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0004221 chbC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006032 chbC CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0001558 celB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006300 chbC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005647 celB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005463 celB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008239 chbC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005806 chbC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008032 chbC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004822 chbC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004910 chbC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005794 chbC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004997 chbC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001540 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0001531 celB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002039 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006034 chbC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007508 chbC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005498 chbC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008162 chbC CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108673 celB CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082906 celB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001597 celB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094474 celB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008122 chbC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008151 chbC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006158 chbC CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000232 chbC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006140 chbC CDS
Person Approved Go view Shigella flexneri 301 ABT-0087807 celB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0001578 celB CDS
Person Approved Go view Shigella sonnei 046 ADD-0001543 chbC CDS
Automated Process Approved Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002046 CDS
Automated Process Approved Go view Yersinia enterocolitica 8081 BAH-0002912 celB CDS
Automated Process Approved Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003034 celB CDS
Automated Process Approved Go view Yersinia intermedia ATCC 29909 [T] AEH-0001768 celB CDS
Automated Process Approved Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002099 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240302 celB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007691 chbC CDS
Automated Process Approved Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002897 celB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006474 chbC CDS
Automated Process Approved Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000803 celB CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124257 celB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004461 chbC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005373 chbC CDS
Automated Process Approved Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002033 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009376 chbC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004748 chbC CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030922 celB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007251 chbC CDS
Automated Process Approved Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001412 celB CDS
Automated Process Approved Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001903 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005297 chbC CDS
Automated Process Approved Go view Yersinia pseudotuberculosis IP31758 ADS-0005048 chbC CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0003026 celB pseudogene
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003637 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001343 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0012296 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004164 chbC CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1814856 to 1826214
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0005780katECDSforward18138671816128Downstream
ABE-0285464repeat_regionforward18161851816373Downstream
ABE-0005783chbGCDScomplement18163861817135Downstream
ABE-0005785chbFCDScomplement18171481818500Downstream
ABE-0005790chbRCDScomplement18186051819447Downstream
ABE-0005792chbACDScomplement18194551819805Downstream
ABE-0005795chbCCDScomplement18198561821214Matches
ABE-0005797chbBCDScomplement18212991821619Upstream
ABE-0005799osmECDScomplement18219181822256Upstream
ABE-0005803nadECDSforward18224581823285Upstream
ABE-0285465repeat_regionforward18233311823428Upstream
ABE-0005807choCDSforward18235151824402Upstream
ABE-0005809vesCDScomplement18243621824937Upstream
ABE-0005812spyCDScomplement18251401825625Upstream
ABE-0005815astECDScomplement18259551826923Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.