Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0005815 (astE) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0005815 showshow history
Names
astE JW1733 ECK1742 ydjS b1744
Product
succinylglutamate desuccinylase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1825955 1826923 969 323
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR007036 (IPR007036 Succinylglutamate desuccinylase/aspartoacylase) Apr 2008
Automated Process Approved IPR016681 (IPR016681 Succinylglutamate desuccinylase) Jul 2018
Automated Process Approved PF04952 (PF04952 Succinylglutamate desuccinylase / Aspartoacylase family) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0009063 cellular amino acid catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0019544 arginine catabolic process to glutamate GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO biological process GO:0019545 arginine catabolic process to succinate GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007036
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0009017 succinylglutamate desuccinylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0016788 hydrolase activity, acting on ester bonds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007036
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name astE Published Annotation - Swiss-Prot Accession Number: P76215 Aug 2002
Person Approved synonym JW1733 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK1742 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ydjS Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved locus tag b1744 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product succinylglutamate desuccinylase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name succinylglutamate desuccinylase Published Annotation - Swiss-Prot Accession Number: P76215 Jan 2006
Protein Family
Automated Process Approved protein family IPR016681 Succinylglutamate desuccinylase Protein Sequence Similarity - InterPro Domain: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR007036 Succinylglutamate desuccinylase/aspartoacylase Protein Sequence Similarity - InterPro Domain: IPR007036
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Protein Sequence Similarity - PFAM Model Name: PF04952
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 3.1.-.- Published Annotation - Swiss-Prot Accession Number: P76215 Feb 2006
Automated Process Uncurated EC number 3.5.1.96 Published Annotation - Database Name: EC2GO: GO:0009017
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 1.1.3 (metabolism; carbon utilization; amino acids) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13995 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P76215 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0005815 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P76215 Published Annotation - Swiss-Prot Accession Number: P76215 Jan 2005
Automated Process Approved db xref GeneID:946256 Published Annotation - Entrez Gene Database ID: 946256
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1788040 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved function enzyme; Not classified Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note GO_process: GO:0009063 - cellular amino acid catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC74814.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0009063 cellular amino acid catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0019544 arginine catabolic process to glutamate GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007036
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0019545 arginine catabolic process to succinate GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0016788 hydrolase activity, acting on ester bonds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007036
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0009017 succinylglutamate desuccinylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR016681
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003883 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002022 astE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002161 astE CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001188 astE CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002147 astE CDS
Ortholog
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0002395 astE CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002023 astE CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0301137 astE CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0001795 astE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001919 astE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007794 astE CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0001702 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010321 astE CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0001654 ydjS CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002646 astE CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007584 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008154 astE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010210 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078263 astE CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0001958 astE CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002285 astE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007324 astE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009705 astE CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0001992 astE CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006403 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006257 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005846 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010149 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008709 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007552 astE CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007302 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007596 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010805 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008686 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009939 astE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007765 astE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007783 astE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008454 astE CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0026532 astE CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006720 astE CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006502 astE CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002149 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001640 astE CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0001791 astE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002325 astE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002105 astE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002160 astE CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0001951 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0001945 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0001446 astE CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132433 astE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004124 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0001946 ydjS CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0001919 astE CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0001229 astE CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0004918 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001038 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004061 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001051 astE CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0003082 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0001737 astE CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0002485 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0009381 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0002454 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289765 astE CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0004880 astE CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0143953 astE CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0001872 astE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006040 astE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001742 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001552 astE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006308 astE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005666 astE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005482 astE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008247 astE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005798 astE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008024 astE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004814 astE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007564 astE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004902 astE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005786 astE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005005 astE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001546 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001537 astE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002048 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006027 astE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007515 astE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005490 astE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008154 astE CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0108681 astE CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0082900 astE CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0001588 astE CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0094455 astE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008129 astE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008144 astE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006165 astE CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002924 astE CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0265921 astE CDS
Person Approved Go view Shigella boydii 227 ADV-0001489 ydjS CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0007401 astE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006133 astE CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0001768 ydjS CDS
Person Uncurated Go view Shigella flexneri 2457T ABQ-0072675 ydjS CDS
Person Uncurated Go view Shigella flexneri 301 ABT-0255980 ydjS CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001571 ydjS CDS
Person Approved Go view Shigella sonnei 046 ADD-0001534 astE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000368 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0007075 astE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000785 astE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000291 astE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000111 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238404 astE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006629 astE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001635 astE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004450 astE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001463 astE CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0121840 astE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005386 astE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000602 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009132 astE CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032064 astE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006025 astE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001379 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007216 astE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006090 astE CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002043 astE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002388 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002637 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21961mutantTn5 InsertionRequest the StrainABE-0005815astEydjS::Tn5KAN-2 at position 122 in Minus orientation ,+ pKD460Blattner Laboratory
FB23505mutantTn5 InsertionRequest the StrainABE-0005815astEydjS::Tn5KAN-2 at position 122 in Minus orientation ,- pKD46 RESEQD By acciden5Tim Durfee (durf@genome.wisc.edu)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1820955 to 1831923
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0005795chbCCDScomplement18198561821214Downstream
ABE-0005797chbBCDScomplement18212991821619Downstream
ABE-0005799osmECDScomplement18219181822256Downstream
ABE-0005803nadECDSforward18224581823285Downstream
ABE-0285465repeat_regionforward18233311823428Downstream
ABE-0005807choCDSforward18235151824402Downstream
ABE-0005809vesCDScomplement18243621824937Downstream
ABE-0005812spyCDScomplement18251401825625Downstream
ABE-0005815astECDScomplement18259551826923Matches
ABE-0005817astBCDScomplement18269161828259Overlaps Upstream
ABE-0005820astDCDScomplement18282561829734Upstream
ABE-0005822astACDScomplement18297311830765Upstream
ABE-0005824astCCDScomplement18307621831982Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.