Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0006991 (metG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0006991 showshow history
Names
metG JW2101 ECK2107 b2114
Product
methionyl-tRNA synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2194300 2196333 2034 678
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000765
EnteroFam0006991: Trusted threshold=2017.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR002547 (IPR002547 tRNA-binding domain) Apr 2008
Automated Process Approved IPR002304 (IPR002304 (DEPRECATED) Methionyl-tRNA synthetase, class Ia) Apr 2008
Automated Process Approved IPR009080 (IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding) Apr 2008
Automated Process Approved IPR012340 (IPR012340 Nucleic acid-binding, OB-fold) Apr 2008
Automated Process Approved IPR008224 (IPR008224 (DEPRECATED) Methionyl-tRNA synthetase, class Ia, dimer-forming) Apr 2008
Automated Process Approved IPR001412 (IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site) Apr 2008
Automated Process Approved IPR015413 (IPR015413 Methionyl/Leucyl tRNA synthetase) Apr 2008
Automated Process Approved IPR014758 (IPR014758 Methionyl-tRNA synthetase) Apr 2008
Automated Process Approved IPR004495 (IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal) Apr 2008
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Apr 2008
Automated Process Approved IPR029038 (IPR029038 Methionyl-tRNA synthetase, Zn-domain) Jul 2018
Automated Process Approved PF09334 (PF09334 tRNA synthetases class I (M)) Jul 2018
Automated Process Approved PF01588 (PF01588 Putative tRNA binding domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008224
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006431 methionyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004495
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Approved GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR015413, IPR014758, IPR004495, IPR009080
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004825 methionine-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000049 tRNA binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002547
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name metG Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym ECK2107 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW2101 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2114 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product methionyl-tRNA synthetase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name methionine tRNA synthetase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0006991: Trusted threshold=2017.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000765
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR002547 tRNA-binding domain Protein Sequence Similarity - InterPro Domain: IPR002547
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Protein Sequence Similarity - InterPro Domain: IPR009080
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR002304 (DEPRECATED) Methionyl-tRNA synthetase, class Ia Protein Sequence Similarity - InterPro Domain: IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR012340 Nucleic acid-binding, OB-fold Protein Sequence Similarity - InterPro Domain: IPR012340
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR029038 Methionyl-tRNA synthetase, Zn-domain Protein Sequence Similarity - InterPro Domain: IPR029038
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF09334 tRNA synthetases class I (M) Protein Sequence Similarity - PFAM Model Name: PF09334
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01588 Putative tRNA binding domain Protein Sequence Similarity - PFAM Model Name: PF01588
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Protein Sequence Similarity - InterPro Domain: IPR004495
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR014758 Methionyl-tRNA synthetase Protein Sequence Similarity - InterPro Domain: IPR014758
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR008224 (DEPRECATED) Methionyl-tRNA synthetase, class Ia, dimer-forming Protein Sequence Similarity - InterPro Domain: IPR008224
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Protein Sequence Similarity - InterPro Domain: IPR001412
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR015413 Methionyl/Leucyl tRNA synthetase Protein Sequence Similarity - InterPro Domain: IPR015413
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 6.1.1.10 Published Annotation - Swiss-Prot Accession Number: P00959 Feb 2006
Automated Process Uncurated EC number 6.1.1.- Published Annotation - Database Name: EC2GO: GO:0004812
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 2.3.1 (information transfer; protein related; amino acid -activation) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10586 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946643 Published Annotation - Entrez Gene Database ID: 946643
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P00959 Published Annotation - Swiss-Prot Accession Number: P00959 Jan 2005
Automated Process Approved db xref UniProtKB/Swiss-Prot:P00959 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1788432 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0006991 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Aminoacyl tRNA synthetases, tRNA modification Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note methionine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75175.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 9.97
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model the E-matrix Experimental - PubMed ID: 19282977
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008224
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006431 methionyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004495
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Approved GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR015413, IPR014758, IPR004495, IPR009080
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004825 methionine-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002304
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000049 tRNA binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002547
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000765 metG CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001316 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000225 metG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000158 metG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000394 metG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000362 metG CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0003604 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0004394 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129379 metG CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0104829 metG CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104216 metG CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002936 metG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001173 metG CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002963 metG CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003678 metG_1 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007825 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0020479 metG CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001282 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003583 metG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0302938 metG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002461 metG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001352 metG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003452 metG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005070 metG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002170 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009135 metG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002068 metG CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002213 metG CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007163 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008535 metG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005504 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078778 metG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002440 metG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002777 metG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007732 metG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006513 metG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002405 metG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006840 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005808 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006497 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005023 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010402 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008224 metG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0007937 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008527 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005784 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008320 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009513 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007443 metG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009353 metG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027008 metG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0004938 metG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006923 metG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002691 metG CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0001986 metG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002177 metG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002594 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002534 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002489 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002474 metG CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176625 metG CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002423 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000928 metG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0132925 metG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001890 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002395 metG CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0001374 metG CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003349 metG CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002568 metG CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0000897 metG CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005771 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001907 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002024 metG CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001860 metG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0002173 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002605 metG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001542 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010369 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001277 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289591 metG CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005777 metG CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061664 metG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000836 metG CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000382 metG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004145 metG CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0006009 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0140304 metG CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0004220 metG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006469 metG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000774 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0002538 metG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006768 metG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006849 metG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006516 metG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004234 metG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006751 metG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006051 metG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006506 metG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004149 metG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005898 metG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006707 metG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007556 metG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000697 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000697 metG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000872 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006940 metG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006388 metG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006472 metG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005695 metG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0109835 metG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082414 metG CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002662 metG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0096884 metG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007123 metG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004629 metG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005439 metG CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004239 metG CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0266216 metG CDS
Person Uncurated Go view Shigella boydii 227 ADV-0001008 metG CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0006253 metG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003619 metG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002515 metG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073427 metG CDS
Person Approved Go view Shigella flexneri 301 ABT-0088454 metG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002328 metG CDS
Person Approved Go view Shigella sonnei 046 ADD-0002370 metG CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0001104 VC1036 CDS
Person Uncurated Go view Wigglesworthia morsitans AEQ-0000061 metG CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0002662 metG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000430 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008008 metG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000541 metG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001351 metG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001337 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237627 metG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007317 metG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000995 metG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005650 metG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001807 metG CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120341 metG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005656 metG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004388 metG CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008946 metG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004927 metG CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032380 metG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007780 metG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002954 metG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001739 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006594 metG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006438 metG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0001606 metG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001952 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003027 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0016614 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003090 metG CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20619mutantTn5 InsertionRequest the StrainABE-0006991metGmetG::Tn5KAN-2 at position 1637 in Plus orientation ,+ pKD460Blattner Laboratory
FB20620mutantTn5 InsertionRequest the StrainABE-0006991metGmetG::Tn5KAN-2 at position 1637 in Plus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2189300 to 2201333
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0006974yehBCDScomplement21884302190910Upstream
ABE-0006978yehCCDScomplement21909262191645Upstream
ABE-0006980yehDCDScomplement21916802192222Upstream
ABE-0006984yehECDScomplement21925152192796Upstream
ABE-0006987mrpCDScomplement21930592194168Upstream
ABE-0006991metGCDSforward21943002196333Matches
ABE-0006997molR_1CDSpforward21964742197298Downstream
ABE-0285100yehHpseudogeneforward21964742200269Downstream
ABE-0006999molR_2CDSpforward21974102199347Downstream
ABE-0007001molR_3CDSpforward21993222200269Downstream
ABE-0007003yehICDSforward22002792203911Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.