Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0007108 (mglB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0007108 showshow history
Names
mglB JW2137 ECK2143 PMG b2150
Product
periplasmic-binding component of an ABC superfamily methyl-galactoside transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2239350 2240348 999 333
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001761 (IPR001761 Periplasmic binding protein/LacI sugar binding domain) Apr 2008
Automated Process Approved IPR025997 (IPR025997 Periplasmic binding protein) Jul 2018
Automated Process Approved IPR028082 (IPR028082 Periplasmic binding protein-like I) Jul 2018
Automated Process Approved PF13407 (PF13407 Periplasmic binding protein domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0006457 protein folding Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mglB Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym PMG Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW2137 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK2143 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2150 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product periplasmic-binding component of an ABC superfamily methyl-galactoside transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2008
Person Approved alternate product name galactose-binding transport protein; receptor for galactose taxis Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name galactose transport protein (ABC superfamily, peri_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name methyl-galactoside transporter subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Automated Process Approved protein family IPR028082 Periplasmic binding protein-like I Protein Sequence Similarity - InterPro Domain: IPR028082
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR001761 Periplasmic binding protein/LacI sugar binding domain Protein Sequence Similarity - InterPro Domain: IPR001761
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF13407 Periplasmic binding protein domain Protein Sequence Similarity - PFAM Model Name: PF13407
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR025997 Periplasmic binding protein Protein Sequence Similarity - InterPro Domain: IPR025997
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 4.3.A.1.p (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, periplasmic binding component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.2 (location of gene products; periplasmic space) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.119 (transport; substrate; methylgalactoside/galactose) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 2.3.4 (information transfer; protein related; chaperoning, folding) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AEE5 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1788473 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:949041 Published Annotation - Entrez Gene Database ID: 949041
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0007108 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0AEE5 Published Annotation - Swiss-Prot Accession Number: P0AEE5 Jan 2006
Automated Process Approved db xref EcoGene:EG10593 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Carbohydrates, organic acids, alcohols Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note galactose-binding transport protein; receptor for galactose taxis; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006457 - protein folding Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75211.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Periplasmic Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0006457 protein folding Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003369 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001999 mglB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002093 mglB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002859 mglB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002227 mglB CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002968 mglB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001137 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0002996 mglB CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003712 mglB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007978 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0018377 mglB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001148 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003608 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0302968 mglB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002469 mglB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001344 mglB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003415 mglB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005106 mglB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002207 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009188 mglB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002101 mglB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002176 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007120 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006577 mglB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005469 CDS
Person Uncurated Go view Escherichia coli BL21(DE3) AHL-0005435 pseudogene
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078820 mglB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002483 mglB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002812 mglB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009768 mglB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005767 mglB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002441 mglB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006881 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000510 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006620 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005147 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006588 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008639 mglB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008123 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005809 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005907 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009622 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007190 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009361 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008865 mglB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009238 mglB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027127 mglB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0004979 mglB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006958 mglB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002727 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002021 mglB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002216 mglB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002632 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002576 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002527 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002510 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176661 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002457 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002296 mglB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133050 mglB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000245 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002430 mglB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0000985 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002109 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002596 mglB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0000930 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005603 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001915 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002032 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001868 mglB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0002164 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002613 mglB CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0001534 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010378 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001269 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289601 mglB CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005786 mglB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006505 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000733 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002575 mglB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006983 mglB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006639 mglB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004198 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006787 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006087 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006543 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004186 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005935 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006744 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007520 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000661 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000661 mglB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000831 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006975 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006425 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006508 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005731 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0109939 mglB CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0082378 mglB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002702 mglB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0096987 mglB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007086 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004592 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005475 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0004249 CDS
Person Approved Go view Shigella boydii 227 ADV-0002414 mglB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0006213 mglB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003547 mglB CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002455 mglB CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073493 mglB CDS
Person Approved Go view Shigella flexneri 301 ABT-0088502 mglB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002390 mglB CDS
Person Approved Go view Shigella sonnei 046 ADD-0002416 mglB CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0001201 mglB CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0001397 VC1325 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001137 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008115 mglB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002241 mglB_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001321 mglB_1 CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002561 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237579 mglB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007133 mglB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000976 mglB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005635 mglB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001792 mglB CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120272 mglB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005641 mglB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004406 mglB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002450 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009053 mglB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004942 mglB CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032395 mglB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007798 mglB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002972 mglB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001759 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006607 mglB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006450 mglB CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001594 mglB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001935 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003043 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0016753 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003061 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20653mutantTn5 InsertionRequest the StrainABE-0007108mglBmglB::Tn5KAN-2 at position 322 in Minus orientation ,+ pKD460Blattner Laboratory
FB20654mutantTn5 InsertionRequest the StrainABE-0007108mglBmglB::Tn5KAN-2 at position 322 in Minus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2234350 to 2245348
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0007096preTCDSforward22340332235271Downstream
ABE-0007098preACDSforward22352652236500Downstream
ABE-0285496repeat_regionforward22365342236683Downstream
ABE-0007101mglCCDScomplement22367432237753Downstream
ABE-0007103mglACDScomplement22377692239289Downstream
ABE-0007108mglBCDScomplement22393502240348Matches
ABE-0007110galSCDScomplement22406282241668Upstream
ABE-0007115yeiBCDScomplement22418102242967Upstream
ABE-0007117folECDScomplement22429842243652Upstream
ABE-0007124yeiGCDSforward22439102244746Upstream
ABE-0007126cirACDScomplement22447782246769Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.