Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0007172 (fruA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0007172 showshow history
Names
fruA JW2154 ECK2160 ptsF b2167
Product
PTS system fructose-specific IIB'BC component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2259719 2261410 1692 564
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Apr 2008
Automated Process Approved IPR006327 (IPR006327 Phosphotransferase system, fructose IIC component) Apr 2008
Automated Process Approved IPR013011 (IPR013011 Phosphotransferase system, EIIB component, type 2) Apr 2008
Automated Process Approved IPR003353 (IPR003353 Phosphotransferase system, fructose-specific IIB subunit) Apr 2008
Automated Process Approved IPR013014 (IPR013014 Phosphotransferase system, EIIC component, type 2) Apr 2008
Automated Process Approved IPR003501 (IPR003501 Phosphotransferase system, EIIB component, type 2/3) Jul 2018
Automated Process Approved IPR036095 (IPR036095 PTS system IIB component-like superfamily) Jul 2018
Automated Process Approved PF02378 (PF02378 Phosphotransferase system, EIIC) Jul 2018
Automated Process Approved PF02302 (PF02302 PTS system, Lactose/Cellobiose specific IIB subunit) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006327
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0022877 protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003353
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR003501, IPR006327, IPR036095
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fruA Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ptsF Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW2154 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK2160 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2167 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product PTS system fructose-specific IIB'BC component Experimental - PubMed ID: 8626640
Reference: Escherichia coli K-12 		Mar 2008
Automated Process Approved alternate product name fused fructose-specific PTS enzymes: IIBcomponent/IIC components Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name PTS family enzyme IIB'BC, fructose-specific Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name PTS system, fructose-specific transport protein Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR013014 Phosphotransferase system, EIIC component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013014
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Protein Sequence Similarity - PFAM Model Name: PF02302
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003501 Phosphotransferase system, EIIB component, type 2/3 Protein Sequence Similarity - InterPro Domain: IPR003501
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003353 Phosphotransferase system, fructose-specific IIB subunit Protein Sequence Similarity - InterPro Domain: IPR003353
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006327 Phosphotransferase system, fructose IIC component Protein Sequence Similarity - InterPro Domain: IPR006327
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR013011 Phosphotransferase system, EIIB component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013011
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036095 PTS system IIB component-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036095
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF02378 Phosphotransferase system, EIIC Protein Sequence Similarity - PFAM Model Name: PF02378
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 2.7.1.69 Published Annotation - Swiss-Prot Accession Number: P20966 Feb 2006
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.63 (transport; substrate; fructose) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.4.A.2 (transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Fructose-Mannitol (Fru) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946672 Published Annotation - Entrez Gene Database ID: 946672
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P20966 Published Annotation - Swiss-Prot Accession Number: P20966 Jan 2005
Automated Process Approved db xref GI:1788492 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P20966 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0007172 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10336 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function regulator; Degradation of small molecules: Carbon compounds Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note PTS system, fructose-specific transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75228.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006327
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003352
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0022877 protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003353
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR003352, IPR003501, IPR006327, IPR036095
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001487 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000116 fruA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001729 fruA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001245 fruA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000167 fruA CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000298 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0000268 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0002982 CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001115 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003011 fruA CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003733 fruA_3 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007282 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0020028 fruA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001708 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003620 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0303026 fruA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002484 fruA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001329 fruA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003399 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005123 fruA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002225 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009171 fruA CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002116 fruA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002159 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0007100 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006595 fruA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005451 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078838 fruA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002502 CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0002829 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009785 fruA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005784 fruA CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002458 fruA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0006900 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000529 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005166 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006607 fruA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008143 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005790 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005926 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010752 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007212 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009381 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010569 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009257 fruA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027144 fruA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0004999 fruA_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0006977 fruA CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002743 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002038 fruA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002233 fruA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002654 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002598 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002549 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002526 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176678 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002475 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002313 fruA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133067 fruA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000226 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002449 fruA CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002329 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003360 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002606 fruA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0000942 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007132 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001931 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002048 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001883 fruA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0002147 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002629 fruA CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001518 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010392 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001254 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289620 fruA CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005801 fruA CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062996 fruA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001503 fruA CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001892 fruA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000109 fruA CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0006459 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0141352 fruA CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0000978 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006521 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000712 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002593 fruA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006819 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007039 fruA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006693 fruA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007692 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006802 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006103 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006557 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004201 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005950 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006759 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007505 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000647 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000647 fruA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000810 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006990 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006440 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006522 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005745 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0109982 fruA CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0082364 fruA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002725 fruA CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097042 fruA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007070 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004576 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005490 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002518 CDS
Person Approved Go view Shigella boydii 227 ADV-0002392 fruA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0006193 fruA CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002667 fruA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073511 fruA CDS
Person Approved Go view Shigella flexneri 301 ABT-0088517 fruA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002407 fruA CDS
Person Approved Go view Shigella sonnei 046 ADD-0002433 fruA CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003405 VCA0516 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001235 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004387 fruA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001250 fruA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003829 fruA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003338 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237341 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005637 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001236 fruA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005406 fruA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002084 fruA CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119548 fruA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006165 fruA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004628 fruA CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005287 fruA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005176 fruA CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032626 fruA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005325 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003221 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002879 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006376 fruA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006667 fruA CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001403 fruA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001688 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003279 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0016803 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0003050 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20664mutantTn5 InsertionRequest the StrainABE-0007172fruAfruA::Tn5KAN-2 at position 236 in Plus orientation ,+ pKD460Blattner Laboratory
FB20665mutantTn5 InsertionRequest the StrainABE-0007172fruAfruA::Tn5KAN-2 at position 236 in Plus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2254719 to 2266410
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0007156rihBCDScomplement22542452255186Downstream
ABE-0007160yeiLCDSforward22553552256014Downstream
ABE-0285498repeat_regionforward22560382256074Downstream
ABE-0007163psuTCDScomplement22560852257335Downstream
ABE-0007165psuGCDScomplement22574292258367Downstream
ABE-0007168psuKCDScomplement22583552259296Downstream
ABE-0007172fruACDScomplement22597192261410Matches
ABE-0007174fruKCDScomplement22614272262365Upstream
ABE-0007180fruBCDScomplement22623652263495Upstream
ABE-0007184setBCDSforward22638632265044Upstream
ABE-0285016yeiWCDScomplement22650412265295Upstream
ABE-0007187yeiPCDSforward22654502266022Upstream
ABE-0007191yeiQCDSforward22662452267711Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.