Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0007543 (nuoG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0007543 showshow history
Names
nuoG JW2278 ECK2277 b2283
Product
NADH:quinone oxidoreductase subunit G
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2397439 2400165 2727 909
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000829
EnteroFam0007543: Trusted threshold=2632.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR001041 (IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain) Apr 2008
Automated Process Approved IPR009010 (IPR009010 Aspartate decarboxylase-like domain superfamily) Apr 2008
Automated Process Approved IPR006656 (IPR006656 Molybdopterin oxidoreductase) Apr 2008
Automated Process Approved IPR010228 (IPR010228 NADH:ubiquinone oxidoreductase, subunit G) Apr 2008
Automated Process Approved IPR006963 (IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain) Apr 2008
Automated Process Approved IPR000283 (IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site) Apr 2008
Automated Process Approved IPR006657 (IPR006657 Molybdopterin dinucleotide-binding domain) Jul 2018
Automated Process Approved IPR019574 (IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding) Jul 2018
Automated Process Approved IPR036010 (IPR036010 2Fe-2S ferredoxin-like superfamily) Jul 2018
Automated Process Approved PF01568 (PF01568 Molydopterin dinucleotide binding domain) Jul 2018
Automated Process Approved PF00384 (PF00384 Molybdopterin oxidoreductase) Jul 2018
Automated Process Approved PF13510 (PF13510 2Fe-2S iron-sulfur cluster binding domain) Jul 2018
Automated Process Approved PF04879 (PF04879 Molybdopterin oxidoreductase Fe4S4 domain) Jul 2018
Automated Process Approved PF10588 (PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0009060 aerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657, IPR006656, IPR006963, IPR019574, IPR010228
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010228
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006656
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0043546 molybdopterin cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO molecular function GO:0009053 (DEPRECATED) electron donor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0051536 iron-sulfur cluster binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name nuoG Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym ECK2277 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW2278 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2283 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product NADH:quinone oxidoreductase subunit G Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name NADH dehydrogenase I chain G Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0007543: Trusted threshold=2632.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000829
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR010228 NADH:ubiquinone oxidoreductase, subunit G Protein Sequence Similarity - InterPro Domain: IPR010228
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00384 Molybdopterin oxidoreductase Protein Sequence Similarity - PFAM Model Name: PF00384
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR009010 Aspartate decarboxylase-like domain superfamily Protein Sequence Similarity - InterPro Domain: IPR009010
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Protein Sequence Similarity - InterPro Domain: IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Protein Sequence Similarity - PFAM Model Name: PF10588
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006656 Molybdopterin oxidoreductase Protein Sequence Similarity - InterPro Domain: IPR006656
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Protein Sequence Similarity - InterPro Domain: IPR019574
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF04879 Molybdopterin oxidoreductase Fe4S4 domain Protein Sequence Similarity - PFAM Model Name: PF04879
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01568 Molydopterin dinucleotide binding domain Protein Sequence Similarity - PFAM Model Name: PF01568
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006657 Molybdopterin dinucleotide-binding domain Protein Sequence Similarity - InterPro Domain: IPR006657
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR036010 2Fe-2S ferredoxin-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036010
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Protein Sequence Similarity - InterPro Domain: IPR000283
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF13510 2Fe-2S iron-sulfur cluster binding domain Protein Sequence Similarity - PFAM Model Name: PF13510
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Protein Sequence Similarity - InterPro Domain: IPR006963
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated EC number 1.6.5.11 Published Annotation - Swiss-Prot Accession Number: P33602
Reference: Escherichia coli K-12 MG1655 		Dec 2018
Person Uncurated EC number 7.1.1.2 Published Annotation - KEGG Database Name: eco:b2283
Reference: Escherichia coli K-12 MG1655 		Dec 2018
Automated Process Uncurated EC number 1.6.-.- Published Annotation - Database Name: EC2GO: GO:0016651
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated EC number 1.-.-.- Published Annotation - Database Name: EC2GO: GO:0016491
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 4.3.D.1 (transport; Primary Active Transporters; Oxidoreduction-driven Active Transporters; The Proton- or sodium ion-translocating NADH Dehydrogenase (NDH) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.3.7 (metabolism; energy metabolism, carbon; anaerobic respiration) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.130 (transport; substrate; Na+) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.4.1 (metabolism; energy production/transport; electron donor) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.3.6 (metabolism; energy metabolism, carbon; aerobic respiration) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated comment The coordinates of nuoG have been changed from those reported in the GenBank entry (GBAN:U00096.2) to correspond to the start site determined by N-terminal sequencing, removing 2 codons from the N-terminus. Experimental - PubMed ID: 7607227
Reference: Escherichia coli B 		Apr 2007
Automated Process Approved db xref UniProtKB/Swiss-Prot:P33602 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P33602 Published Annotation - Swiss-Prot Accession Number: P33602 Jan 2005
Automated Process Approved db xref ASAP:ABE-0007543 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946762 Published Annotation - Entrez Gene Database ID: 946762
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:145693161 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12087 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Energy metabolism, carbon: Aerobic respiration Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note NADH dehydrogenase I chain G; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75343.2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657, IPR006656, IPR006963, IPR019574, IPR010228
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO biological process GO:0009060 aerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010228
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0043546 molybdopterin cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006656
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0051536 iron-sulfur cluster binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0009053 (DEPRECATED) electron donor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001041
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000829 nuoG CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000948 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000372 nuoG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000245 nuoG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001198 nuoG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001133 nuoG CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0001718 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0001314 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129429 nuoG CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0104874 nuoG CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104267 nuoG CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003067 nuoG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0001029 nuoG CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003124 nuoG CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0003842 nuoG CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0006052 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0017326 nuoG CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002819 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0303249 nuoG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002561 nuoG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001261 nuoG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003252 nuoG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005247 nuoG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002340 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008939 nuoG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002228 nuoG CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0002043 nuoG CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006958 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006709 nuoG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006654 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0078961 nuoG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002637 nuoG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003012 nuoG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006560 nuoG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005899 nuoG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002570 nuoG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007010 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000650 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006760 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005285 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006727 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006312 nuoG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008262 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005670 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006048 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006980 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007330 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006867 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006208 nuoG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007502 nuoG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027256 nuoG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005118 nuoG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007105 nuoG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002854 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002149 nuoG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002357 nuoG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0002822 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002741 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002672 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002657 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002581 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002436 nuoG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133178 nuoG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000105 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002570 nuoG CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002411 nuoG CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003491 nuoG CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002682 nuoG CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001014 nuoG CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007393 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0001987 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0001751 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0001953 nuoG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0002066 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002704 nuoG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001442 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010466 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001197 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0285901 nuoG CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005860 nuoG CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0063308 nuoG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001734 nuoG CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000764 nuoG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000265 nuoG CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0007803 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0143899 nuoG CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0003422 nuoG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006631 nuoG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000604 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0002717 nuoG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006933 nuoG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007432 nuoG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007065 nuoG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006206 nuoG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006924 nuoG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006226 nuoG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006658 nuoG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004309 nuoG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006065 nuoG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006869 nuoG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007391 nuoG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000542 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000541 nuoG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000661 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007114 nuoG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005068 nuoG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006628 nuoG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006603 nuoG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0110282 nuoG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082253 nuoG CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002868 nuoG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0097413 nuoG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006959 nuoG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004464 nuoG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008719 nuoG CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002414 nuoG CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0264571 nuoG CDS
Person Approved Go view Shigella boydii 227 ADV-0002562 nuoG CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008068 nuoG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005951 nuoG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002851 nuoG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073636 nuoG CDS
Person Approved Go view Shigella flexneri 301 ABT-0088620 nuoG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002519 nuoG CDS
Person Approved Go view Shigella sonnei 046 ADD-0002561 nuoG CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0005052 nuoG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002153 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004045 nuoG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000623 nuoG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003770 nuoG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002529 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239975 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005925 nuoG CDS
Person Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002465 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007926 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000917 nuoG CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123822 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004699 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005597 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006917 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005490 nuoG CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031324 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008210 nuoG CDS
Person Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002583 nuoG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002350 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005775 nuoG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005425 nuoG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002670 nuoG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003194 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001840 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0017181 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0002969 nuoG CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20742mutantTn5 InsertionRequest the StrainABE-0007543nuoGnuoG::Tn5KAN-2 at position 519 in Minus orientation ,- pKD460Blattner Laboratory
FB20743mutantTn5 InsertionRequest the StrainABE-0007543nuoGnuoG::Tn5KAN-2 at position 519 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2392439 to 2405165
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0007529nuoMCDScomplement23915122393041Downstream
ABE-0285507repeat_regionforward23931312393166Downstream
ABE-0007532nuoLCDScomplement23932052395046Downstream
ABE-0007534nuoKCDScomplement23950432395345Downstream
ABE-0007536nuoJCDScomplement23953422395896Downstream
ABE-0007539nuoICDScomplement23959082396450Downstream
ABE-0007541nuoHCDScomplement23964652397442Overlaps Downstream
ABE-0007543nuoGCDScomplement23974392400165Matches
ABE-0007545nuoFCDScomplement24002182401555Upstream
ABE-0007547nuoECDScomplement24015522402052Upstream
ABE-0007549nuoCCDScomplement24020552403845Upstream
ABE-0007551nuoBCDScomplement24039512404613Upstream
ABE-0007553nuoACDScomplement24046292405072Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.