Escherichia coli K-12 MG1655
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0007967 (ptsI) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0007967 showshow history
Names
ptsI JW2409 ECK2411 ctr b2416
Product
PTS enzyme I
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2534066 2535793 1728 576
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000121 (IPR000121 PEP-utilising enzyme, C-terminal) Apr 2008
Automated Process Approved IPR006318 (IPR006318 Phosphotransferase system, enzyme I-like) Apr 2008
Automated Process Approved IPR008279 (IPR008279 PEP-utilising enzyme, mobile domain) Apr 2008
Automated Process Approved IPR008731 (IPR008731 Phosphotransferase system, enzyme I N-terminal) Apr 2008
Automated Process Approved IPR015813 (IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily) Jul 2018
Automated Process Approved IPR036637 (IPR036637 Phosphohistidine domain superfamily) Jul 2018
Automated Process Approved IPR036618 (IPR036618 PtsI, HPr-binding domain superfamily) Jul 2018
Automated Process Approved PF00391 (PF00391 PEP-utilising enzyme, mobile domain) Jul 2018
Automated Process Approved PF02896 (PF02896 PEP-utilising enzyme, PEP-binding domain) Jul 2018
Automated Process Approved PF05524 (PF05524 PEP-utilising enzyme, N-terminal) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0016310 phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000121
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR015813
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008965 phosphoenolpyruvate-protein phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000121
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ptsI Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ctr Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym ECK2411 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW2409 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2416 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product PTS enzyme I Published Annotation - EcoCyc Accession Number: EG10789
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Approved alternate product name PEP-protein phosphotransferase system enzyme I Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name PTS family enzyme I and Hpr components, PEP-protein phosphotransferase Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name PEP-protein phosphotransferase of PTS system (enzyme I) Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Automated Process Approved protein family IPR006318 Phosphotransferase system, enzyme I-like Protein Sequence Similarity - InterPro Domain: IPR006318
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR000121 PEP-utilising enzyme, C-terminal Protein Sequence Similarity - InterPro Domain: IPR000121
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036637 Phosphohistidine domain superfamily Protein Sequence Similarity - InterPro Domain: IPR036637
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR036618 PtsI, HPr-binding domain superfamily Protein Sequence Similarity - InterPro Domain: IPR036618
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR008731 Phosphotransferase system, enzyme I N-terminal Protein Sequence Similarity - InterPro Domain: IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Protein Sequence Similarity - InterPro Domain: IPR015813
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00391 PEP-utilising enzyme, mobile domain Protein Sequence Similarity - PFAM Model Name: PF00391
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR008279 PEP-utilising enzyme, mobile domain Protein Sequence Similarity - InterPro Domain: IPR008279
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF02896 PEP-utilising enzyme, PEP-binding domain Protein Sequence Similarity - PFAM Model Name: PF02896
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF05524 PEP-utilising enzyme, N-terminal Protein Sequence Similarity - PFAM Model Name: PF05524
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Automated Process Uncurated EC number 2.7.-.- Published Annotation - Database Name: EC2GO: GO:0016772
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Approved EC number 2.7.3.9 Published Annotation - Swiss-Prot Accession Number: P08839 Feb 2006
Person Uncurated MultiFun 4.8.A.7 (transport; Group Translocators; Accessory Factors Involved in Transport; The Phosphotransferase System Enzyme I (EI) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.173 (transport; substrate; sugar) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P08839 Published Annotation - Swiss-Prot Accession Number: P08839 Jan 2005
Automated Process Approved db xref GeneID:946879 Published Annotation - Entrez Gene Database ID: 946879
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1788756 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P08839 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0007967 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10789 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note PEP-protein phosphotransferase system enzyme I; GO_process: GO:0016052 - carbohydrate catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75469.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 9.97
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0016310 phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000121
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR015813
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008965 phosphoenolpyruvate-protein phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000121
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008731
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000904 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000796 ptsI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000539 ptsI CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001144 ptsI CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001187 ptsI CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000212 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002851 CDS
Person Uncurated Go view Buchnera aphidicola APS ABZ-0129334 ptsI CDS
Person Uncurated Go view Buchnera aphidicola Bp ABW-0104786 ptsI CDS
Person Uncurated Go view Buchnera aphidicola Sg [T] ABV-0104171 ptsI CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003182 ptsI CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0000902 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003264 ptsI_1 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003947 ptsI_1 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008315 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0016784 ptsI CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000856 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003881 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0303600 ptsI CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002681 ptsI CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001143 ptsI CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003111 ptsI CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006841 ptsI CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002460 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008809 ptsI CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002381 ptsI CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001880 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006820 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009466 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079095 ptsI CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002763 ptsI CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003238 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009924 ptsI CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008480 ptsI CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002759 ptsI CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007137 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000760 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006990 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005511 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0004985 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006681 ptsI CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008487 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006330 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006279 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007936 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010766 ptsI CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008062 ptsI CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027390 ptsI CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008017 ptsI_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007224 ptsI CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002966 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002272 ptsI CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002494 ptsI CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003169 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002862 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002960 CDS
Person Uncurated Go view Escherichia coli Nissle 1917 AML-0002782 pseudogene
Automated Process Approved Go view Escherichia coli SE11 AFS-0002755 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002570 ptsI CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133307 ptsI CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003607 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002758 ptsI CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002538 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002063 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002772 ptsI CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001115 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008163 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002130 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003494 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002090 ptsI CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001922 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002844 ptsI CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0001298 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010579 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001093 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0290932 ptsI CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005963 ptsI CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061127 ptsI CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000492 ptsI CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000219 ptsI CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001345 ptsI CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005373 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006745 ptsI CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000472 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002843 ptsI CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007059 ptsI CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007821 ptsI CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007427 ptsI CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006087 ptsI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007054 ptsI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006936 ptsI CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007127 ptsI CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006403 ptsI CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006178 ptsI CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006988 ptsI CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008149 ptsI CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000433 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000433 ptsI CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000528 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007234 ptsI CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004948 ptsI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006744 ptsI CDS
Person Uncurated Go view Salmonella Typhi CT18 ABX-0110591 pseudogene
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0082137 CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0002995 ptsI CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0097750 ptsI CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006841 ptsI CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004343 ptsI CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006033 ptsI CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002254 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0265818 ptsI CDS
Person Approved Go view Shigella boydii 227 ADV-0002695 ptsI CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008173 ptsI CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004345 ptsI CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0002997 ptsI CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073763 ptsI CDS
Person Approved Go view Shigella flexneri 301 ABT-0088732 ptsI CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002640 ptsI CDS
Person Approved Go view Shigella sonnei 046 ADD-0002740 ptsI CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0001033 VC0965 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0005778 ptsI CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002935 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003598 ptsI CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001441 ptsI CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001119 ptsI CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002809 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240610 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006864 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002637 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006245 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000515 ptsI CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125332 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007656 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007117 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0004955 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005647 ptsI CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031165 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007020 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001671 ptsI CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002523 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005616 ptsI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005275 ptsI CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002811 ptsI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003367 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001668 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0017640 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001842 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20789mutantTn5 InsertionRequest the StrainABE-0007967ptsIptsI::Tn5KAN-2 at position 1687 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2529066 to 2540793
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0007938ligACDScomplement25281612530176Upstream
ABE-0007942zipACDScomplement25302472531233Upstream
ABE-0007953cysZCDSforward25314632532224Upstream
ABE-0007957cysKCDSforward25324092533380Upstream
ABE-0007962ptsHCDSforward25337642534021Upstream
ABE-0007967ptsICDSforward25340662535793Matches
ABE-0007971crrCDSforward25358342536343Downstream
ABE-0007973pdxKCDScomplement25363862537237Downstream
ABE-0007977yfeKCDSforward25373422537716Downstream
ABE-0007979yfeSCDSforward25377492538483Downstream
ABE-0285516repeat_regionforward25385352538632Downstream
ABE-0007982cysMCDScomplement25386722539583Downstream
ABE-0285517repeat_regionforward25396072539642Downstream
ABE-0007986cysACDScomplement25397172540814Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.