Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0007986 (cysA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0007986 showshow history
Names
cysA JW2415 ECK2417 b2422
Product
ATP-binding component of an ABC superfamily sulfate/thiosulfate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2539717 2540814 1098 366
Sequence

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000884
EnteroFam0007986: Trusted threshold=894.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR005666 (IPR005666 Sulphate transport system permease protein 1) Apr 2008
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Apr 2008
Automated Process Approved IPR008995 (IPR008995 Molybdate/tungstate binding, C-terminal) Apr 2008
Automated Process Approved IPR014769 (IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal) Apr 2008
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Apr 2008
Automated Process Approved IPR024765 (IPR024765 TOBE-like domain) Jul 2018
Automated Process Approved IPR027417 (IPR027417 P-loop containing nucleoside triphosphate hydrolase) Jul 2018
Automated Process Approved PF00005 (PF00005 ABC transporter) Jul 2018
Automated Process Approved PF12857 (PF12857 TOBE-like domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0008272 sulfate transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005666
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO biological process GO:0006790 sulfur compound metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0042493 response to drug Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0043190 ATP-binding cassette (ABC) transporter complex GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005666
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO molecular function GO:0015419 ABC-type sulfate transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name cysA Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym JW2415 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK2417 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2422 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product ATP-binding component of an ABC superfamily sulfate/thiosulfate transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Automated Process Approved alternate product name sulfate/thiosulfate transporter subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name ATP-binding component of sulfate permease A protein; chromate resistance Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0007986: Trusted threshold=894.3; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000884
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR005666 Sulphate transport system permease protein 1 Protein Sequence Similarity - InterPro Domain: IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR027417 P-loop containing nucleoside triphosphate hydrolase Protein Sequence Similarity - InterPro Domain: IPR027417
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00005 ABC transporter Protein Sequence Similarity - PFAM Model Name: PF00005
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF12857 TOBE-like domain Protein Sequence Similarity - PFAM Model Name: PF12857
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR024765 TOBE-like domain Protein Sequence Similarity - InterPro Domain: IPR024765
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR008995 Molybdate/tungstate binding, C-terminal Protein Sequence Similarity - InterPro Domain: IPR008995
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Protein Sequence Similarity - InterPro Domain: IPR014769
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Automated Process Uncurated EC number 3.6.1.3 Published Annotation - Database Name: EC2GO: GO:0016887
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated EC number 7.3.2.3 Published Annotation - Swiss-Prot Accession Number: P16676
Reference: Escherichia coli K-12 		Dec 2019
Person Uncurated MultiFun 5.6.4 (cell processes; protection; drug resistance/sensitivity) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.179 (transport; substrate; thiosulfate/sulfate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.1.a (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.8.2 (metabolism; metabolism of other compounds; sulfur metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P16676 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1788761 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946889 Published Annotation - Entrez Gene Database ID: 946889
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P16676 Published Annotation - Swiss-Prot Accession Number: P16676 Jan 2005
Automated Process Approved db xref ASAP:ABE-0007986 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10183 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Anions Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note ATP-binding component of sulfate permease A protein; chromate resistance; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0015419 - sulfate transmembrane-transporting ATPase activity; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0042493 - response to drug Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75475.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 9.12
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0008272 sulfate transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005666
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006790 sulfur compound metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0042493 response to drug Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO cellular component GO:0043190 ATP-binding cassette (ABC) transporter complex GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005666
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Approved GO molecular function GO:0015419 ABC-type sulfate transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000884 cysA CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000379 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001224 cysA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001155 cysA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000195 cysA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001371 cysA CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003185 cysA CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0000898 cysA CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003271 cysA_2 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003954 cysA CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0005628 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0019861 cysA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0003185 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003885 cysA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0303620 cysA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0002687 cysA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001138 cysA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003103 cysA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006834 cysA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002465 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008802 cysA CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002386 cysA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001875 cysA CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006814 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006732 cysA CDS
Person Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009472 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079100 cysA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002768 cysA CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003243 cysA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009919 cysA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008485 cysA CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002764 cysA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007142 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000765 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006995 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005516 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0004990 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006676 cysA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008492 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006325 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006284 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008143 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007941 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010771 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006540 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008067 cysA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027395 cysA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008022 cysA_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007231 cysA CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0002971 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002278 cysA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002500 cysA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003164 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002867 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002954 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002787 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176950 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002760 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002576 cysA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133312 cysA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003612 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002763 cysA CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002543 cysA CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002060 cysA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002779 cysA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001119 cysA CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007695 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002135 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003499 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002095 cysA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001917 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002849 cysA CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0001293 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010584 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0001088 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0290927 cysA CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0005968 cysA CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0063591 cysA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001880 cysA CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0004128 cysA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004057 cysA CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0008197 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0139912 cysA CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0000313 cysA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006754 cysA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000462 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0002854 cysA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007068 cysA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007850 cysA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007456 cysA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006079 cysA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007063 cysA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006945 cysA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007118 cysA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006411 cysA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006186 cysA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006997 cysA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008140 cysA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000426 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000425 cysA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000519 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007242 cysA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004939 cysA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006753 cysA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007471 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0110615 cysA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082129 cysA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003004 cysA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0097776 cysA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006831 cysA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004334 cysA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006042 cysA CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002249 cysA CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267244 cysA-1 CDS
Person Approved Go view Shigella boydii 227 ADV-0002703 cysA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008203 cysA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004351 cysA CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0003002 cysA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073771 cysA CDS
Person Uncurated Go view Shigella flexneri 301 ABT-0286425 cysA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002647 cysA CDS
Person Approved Go view Shigella sonnei 046 ADD-0002747 cysA CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0000590 VC0541 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0005799 cysA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003573 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003565 cysA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001448 cysA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003157 cysA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002795 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240654 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006881 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002657 cysA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006263 cysA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000499 cysA CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125400 cysA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007639 cysA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007101 cysA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001097 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0004972 cysA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005665 cysA CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031146 cysA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008754 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001651 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002543 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005599 cysA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005261 cysA CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002827 cysA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003387 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001648 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0017663 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001846 cysA CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20793mutantTn5 InsertionRequest the StrainABE-0007986cysAcysA::Tn5KAN-2 at position 444 in Plus orientation ,+ pKD46 Insertion site is approximate0Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2534717 to 2545814
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0007967ptsICDSforward25340662535793Downstream
ABE-0007971crrCDSforward25358342536343Downstream
ABE-0007973pdxKCDScomplement25363862537237Downstream
ABE-0007977yfeKCDSforward25373422537716Downstream
ABE-0007979yfeSCDSforward25377492538483Downstream
ABE-0285516repeat_regionforward25385352538632Downstream
ABE-0007982cysMCDScomplement25386722539583Downstream
ABE-0285517repeat_regionforward25396072539642Downstream
ABE-0007986cysACDScomplement25397172540814Matches
ABE-0007988cysWCDScomplement25408042541679Overlaps Upstream
ABE-0007990cysUCDScomplement25416792542512Upstream
ABE-0007992cysPCDScomplement25425122543528Upstream
ABE-0007996ucpACDScomplement25438322544623Upstream
ABE-0008000murRCDScomplement25447522545609Upstream
ABE-0008007murQCDSforward25457732546669Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.