Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0008097 (eutD) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0008097 showshow history
Names
eutD ypfA JW2442 ECK2453 eutI b2458
Product
phosphate acetyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2572489 2573505 1017 339
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004614 (IPR004614 Phosphate acetyltransferase) Apr 2008
Automated Process Approved IPR012147 (IPR012147 Phosphate acetyl/butyryltransferase) Apr 2008
Automated Process Approved IPR002505 (IPR002505 Phosphate acetyl/butaryl transferase) Apr 2008
Automated Process Approved PF01515 (PF01515 Phosphate acetyl/butaryl transferase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009310 amine catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0016746 acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002505
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012147
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004614
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Uncurated name eutD Published Sequence Analysis - PubMed ID: 10464203
Reference: Salmonella Typhimurium LT2 		Aug 2007
Person Approved synonym eutI Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved synonym ypfA Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym JW2442 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK2453 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2458 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product phosphate acetyltransferase Published Annotation - EcoCyc Accession Number: G7288
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Approved alternate product name predicted phosphotransacetylase subunit Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Automated Process Approved protein family IPR012147 Phosphate acetyl/butyryltransferase Protein Sequence Similarity - InterPro Domain: IPR012147
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF01515 Phosphate acetyl/butaryl transferase Protein Sequence Similarity - PFAM Model Name: PF01515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004614 Phosphate acetyltransferase Protein Sequence Similarity - InterPro Domain: IPR004614
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR002505 Phosphate acetyl/butaryl transferase Protein Sequence Similarity - InterPro Domain: IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Automated Process Uncurated EC number 2.3.1.- Published Annotation - Database Name: EC2GO: GO:0016407
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated EC number 2.3.-.- Published Annotation - Database Name: EC2GO: GO:0016746
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated EC number 2.3.1.8 Protein Sequence Similarity - InterPro Domain: IPR012147
Reference: Escherichia coli K-12 MG1655 		Dec 2008
Person Uncurated MultiFun 1.1.4 (metabolism; carbon utilization; amines) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG14188 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0008097 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P77218 Published Annotation - Swiss-Prot Accession Number: P77218 Jan 2005
Automated Process Approved db xref GI:1788800 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946940 Published Annotation - Entrez Gene Database ID: 946940
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref UniProtKB/Swiss-Prot:P77218 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase; GO_process: GO:0009310 - amine catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75511.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0009310 amine catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0016746 acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002505
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012147
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004614
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0006811 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0003164 eutD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0003489 eutD CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0003089 eutD CDS
Ortholog
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003295 eutD CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003977 eutD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006807 eutD CDS
Person Approved Go view Escherichia coli 536 (UPEC) AEF-0002490 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008774 pta CDS
Person Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002412 eutD CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001849 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006771 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006759 eutD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007940 EutD CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079127 eutD CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002797 CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003290 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006782 eutD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008512 eutD CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002852 eutD CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007169 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000793 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007022 pta2 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005543 pta2 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005017 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006649 eutD CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008519 pta2 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006298 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006311 pta2 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008170 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007968 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006650 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006567 eutD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008095 eutD CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027422 eutD CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008047 eutD CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007260 pta2 CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0003128 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002314 eutI CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002527 eutD CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003137 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002894 pta CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002926 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002813 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176982 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0002787 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002603 eutD CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133339 CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003639 CDS
Person Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002790 eutD CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0002545 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002801 eutI CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006779 pta2 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000432 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0002882 eutD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007094 pta CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007925 eutD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007526 eutD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006055 pta2 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007088 pta CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006970 pta CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007095 pta2 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006437 pta2 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006212 eutD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007021 eutD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008115 eutD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000403 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000402 eutD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000492 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007267 eutD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004914 pta2 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006776 eutD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007448 pta2 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0110679 eutD CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082105 eutD CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003029 eutD CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0097845 eutD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006807 pta2 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004309 pta2 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006067 pta2 CDS
Person Approved Go view Shigella boydii 227 ADV-0002730 eutD CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008233 eutD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004379 eutD CDS
Person Approved Go view Shigella sonnei 046 ADD-0002774 eutD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003139 pta_2 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0017817 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001883 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20811mutantTn5 InsertionRequest the StrainABE-0008097eutDeutI::Tn5KAN-I-SceI at position 542 in Minus orientation ,- pKD465Blattner Laboratory
FB20812mutantTn5 InsertionRequest the StrainABE-0008097eutDeutI::Tn5KAN-I-SceI at position 542 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2567489 to 2578505
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0008081eutHCDScomplement25668812568107Downstream
ABE-0285521repeat_regionforward25681392568321Downstream
ABE-0008087eutGCDScomplement25683242569511Downstream
ABE-0008089eutJCDScomplement25695012570337Downstream
ABE-0008091eutECDScomplement25703482571751Downstream
ABE-0008093eutNCDScomplement25717632572050Downstream
ABE-0008095eutMCDScomplement25721572572450Downstream
ABE-0008097eutDCDScomplement25724892573505Matches
ABE-0008100eutTCDScomplement25735022574305Overlaps Upstream
ABE-0008102eutQCDScomplement25743022575003Upstream
ABE-0008105eutPCDScomplement25749782575457Upstream
ABE-0008108eutSCDScomplement25754702575805Upstream
ABE-0008111maeBCDScomplement25760982578377Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.