Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0008111 (maeB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0008111 showshow history
Names
maeB ypfF JW2447 ECK2458 b2463
Product
NADP-linked malic enzyme
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2576098 2578377 2280 760
Sequence

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0000890
EnteroFam0008111: Trusted threshold=2183.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR001891 (IPR001891 Malic oxidoreductase) Apr 2008
Automated Process Approved IPR012188 (IPR012188 NAD(P)-dependent malic enzyme) Apr 2008
Automated Process Approved IPR012301 (IPR012301 Malic enzyme, N-terminal domain) Apr 2008
Automated Process Approved IPR012302 (IPR012302 Malic enzyme, NAD-binding) Apr 2008
Automated Process Approved IPR002505 (IPR002505 Phosphate acetyl/butaryl transferase) Apr 2008
Automated Process Approved IPR036291 (IPR036291 NAD(P)-binding domain superfamily) Jul 2018
Automated Process Approved PF00390 (PF00390 Malic enzyme, N-terminal domain) Jul 2018
Automated Process Approved PF03949 (PF03949 Malic enzyme, NAD binding domain) Jul 2018
Automated Process Approved PF01515 (PF01515 Phosphate acetyl/butaryl transferase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR012301
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006108 malate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001891
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR012301
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0016746 acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002505
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012188
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004470 malic enzyme activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001891
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0046872 metal ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012188
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012302
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name maeB Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym ECK2458 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym ypfF Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym JW2447 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2463 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product NADP-linked malic enzyme Experimental - PubMed ID: 36376
Reference: Escherichia coli W 		Mar 2008
Automated Process Approved alternate product name malic enzyme predicted oxidoreductase and predicted phosphotransacetylase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved alternate product name putative multimodular enzyme Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name bifunctional: putative malic oxidoreductase (N-terminal); putative phosphotransacetylase (C-terminal) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name fused malic enzyme predicted oxidoreductase/predicted phosphotransacetylase Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0008111: Trusted threshold=2183.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0000890
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR002505 Phosphate acetyl/butaryl transferase Protein Sequence Similarity - InterPro Domain: IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036291 NAD(P)-binding domain superfamily Protein Sequence Similarity - InterPro Domain: IPR036291
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00390 Malic enzyme, N-terminal domain Protein Sequence Similarity - PFAM Model Name: PF00390
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF03949 Malic enzyme, NAD binding domain Protein Sequence Similarity - PFAM Model Name: PF03949
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR012302 Malic enzyme, NAD-binding Protein Sequence Similarity - InterPro Domain: IPR012302
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR012301 Malic enzyme, N-terminal domain Protein Sequence Similarity - InterPro Domain: IPR012301
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001891 Malic oxidoreductase Protein Sequence Similarity - InterPro Domain: IPR001891
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR012188 NAD(P)-dependent malic enzyme Protein Sequence Similarity - InterPro Domain: IPR012188
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF01515 Phosphate acetyl/butaryl transferase Protein Sequence Similarity - PFAM Model Name: PF01515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Automated Process Uncurated EC number 1.1.1.39 Published Annotation - Database Name: EC2GO: GO:0004471
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Approved EC number 1.1.1.40 Published Annotation - Swiss-Prot Accession Number: P76558 Feb 2006
Automated Process Uncurated EC number 2.3.-.- Published Annotation - Database Name: EC2GO: GO:0016746
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated EC number 1.1.1.38 Published Annotation - Database Name: EC2GO: GO:0004471
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 1.7.1 (metabolism; central intermediary metabolism; unassigned reversible reactions) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:946947 Published Annotation - Entrez Gene Database ID: 946947
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P76558 Published Annotation - Swiss-Prot Accession Number: P76558 Jan 2006
Automated Process Approved db xref UniProtKB/Swiss-Prot:P76558 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1788806 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0008111 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG14193 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note putative multimodular enzyme Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75516.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 9.46
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR012301
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006108 malate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001891
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0004470 malic enzyme activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001891
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012188
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0016746 acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002505
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR012301
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012302
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0046872 metal ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012188
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0000890 maeB CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000913 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001661 maeB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001693 maeB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001698 maeB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001835 maeB CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000224 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002866 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003195 maeB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0000888 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003300 maeB CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0003982 maeB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008340 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016745 maeB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000817 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0003895 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006802 maeB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002495 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008769 maeB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002417 CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001844 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006766 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006764 maeB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007935 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079132 maeB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0002802 maeB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003295 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006777 maeB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008517 maeB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0002857 maeB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007175 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000799 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007027 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005548 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005022 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006644 maeB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008524 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006293 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006316 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008175 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007973 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006655 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006572 maeB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008100 maeB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027427 maeB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008052 maeB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007265 maeB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0003123 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002319 maeB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002532 maeB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003131 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0002900 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0002921 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0002818 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0176987 pseudogene
Automated Process Approved Go view Escherichia coli SE11 AFS-0002792 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0002608 maeB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133344 maeB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003645 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0002795 maeB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002556 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0003796 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0002806 maeB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001129 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008185 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002105 maeB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001908 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0002858 maeB CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0001284 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010594 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061106 maeB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000485 maeB CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0001417 maeB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001323 maeB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005347 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0143083 maeB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006784 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000425 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0002887 maeB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007099 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007936 maeB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007536 maeB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006050 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007093 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006975 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007090 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006442 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006217 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007026 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008110 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000398 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0000397 maeB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000487 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007272 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004909 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006781 maeB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007443 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0110692 maeB CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0082099 maeB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003036 maeB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0097863 maeB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006802 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004304 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006073 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002228 CDS
Person Approved Go view Shigella boydii 227 ADV-0002735 CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008238 maeB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004384 maeB CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0003032 CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0073805 CDS
Person Approved Go view Shigella flexneri 301 ABT-0088763 CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0002682 CDS
Person Approved Go view Shigella sonnei 046 ADD-0002779 maeB CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0004729 maeB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000828 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003477 maeB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001464 maeB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003167 maeB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003561 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240719 maeB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006901 maeB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002682 maeB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006284 maeB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000479 maeB CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125475 maeB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007618 maeB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007081 maeB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002732 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0004992 maeB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005685 maeB CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031126 maeB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008734 maeB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001627 maeB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002566 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005580 maeB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005236 maeB CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0002851 maeB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003419 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001623 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0017838 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001887 CDS
Molecular Interactions to toptop
Author Approval Feature Name Technique Evidence Comment Annotated
Person Approved ABE-0008111 maeB lambda repressor assay Doodle - bnumber: b2463 Oct 2003
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB22423mutantTn5 InsertionRequest the StrainABE-0008111maeBb2463::Tn5KAN-I-SceI at position 492 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2571098 to 2583377
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0008091eutECDScomplement25703482571751Downstream
ABE-0008093eutNCDScomplement25717632572050Downstream
ABE-0008095eutMCDScomplement25721572572450Downstream
ABE-0008097eutDCDScomplement25724892573505Downstream
ABE-0008100eutTCDScomplement25735022574305Downstream
ABE-0008102eutQCDScomplement25743022575003Downstream
ABE-0008105eutPCDScomplement25749782575457Downstream
ABE-0008108eutSCDScomplement25754702575805Downstream
ABE-0008111maeBCDScomplement25760982578377Matches
ABE-0008115talACDSforward25786662579616Upstream
ABE-0008117tktBCDSforward25796362581639Upstream
ABE-0285522repeat_regionforward25816482581716Upstream
ABE-0008120ypfGCDScomplement25817342582777Upstream
ABE-0008123nudKCDScomplement25829032583478Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.