Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0008892 (srlE) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0008892 showshow history
Names
srlE srlA sbl gutA JW5430 ECK2698 gutE b2703
Product
PTS system glucitol/sorbitol-specific IIB component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2826392 2827351 960 320
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR011618 (IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal) Apr 2008
Automated Process Approved IPR011638 (IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal) Apr 2008
Automated Process Approved IPR004702 (IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II) Apr 2008
Automated Process Approved IPR000719 (IPR000719 Protein kinase domain) Apr 2008
Automated Process Approved PF07663 (PF07663 Sorbitol phosphotransferase enzyme II C-terminus) Jul 2018
Automated Process Approved PF03612 (PF03612 Sorbitol phosphotransferase enzyme II N-terminus) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006468 protein phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004672 protein kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name srlE Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym gutE Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW5430 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym srlA Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved synonym sbl Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved synonym gutA Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym ECK2698 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b2703 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product PTS system glucitol/sorbitol-specific IIB component Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Uncurated alternate product name PTS family enzyme IIBC, glucitol/sorbitol-specific Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family PF07663 Sorbitol phosphotransferase enzyme II C-terminus Protein Sequence Similarity - PFAM Model Name: PF07663
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF03612 Sorbitol phosphotransferase enzyme II N-terminus Protein Sequence Similarity - PFAM Model Name: PF03612
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal Protein Sequence Similarity - InterPro Domain: IPR011618
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR000719 Protein kinase domain Protein Sequence Similarity - InterPro Domain: IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal Protein Sequence Similarity - InterPro Domain: IPR011638
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II Protein Sequence Similarity - InterPro Domain: IPR004702
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 2.7.1.69 Published Annotation - Swiss-Prot Accession Number: P56580 Feb 2006
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.4.A.4 (transport; Group Translocators; Phosphotransferase Systems (PEP-dependent PTS); The PTS Glucitol (Gut) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.68 (transport; substrate; glucitol/sorbitol) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG14373 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P56580 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948933 Published Annotation - Entrez Gene Database ID: 948933
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0008892 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:48994905 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P56580 Published Annotation - Swiss-Prot Accession Number: P56580 Jan 2005
Person Approved function transport; Transport of small molecules: Carbohydrates, organic acids, alcohols Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; GO_process: GO:0016052 - carbohydrate catabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAT48149.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved sequence correction version m56: F128 to S, F230 to L Experimental - GenBank Accession Number: AG613244
Reference: Escherichia coli 		May 2004
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006468 protein phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR011638, IPR011618, IPR004702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0004672 protein kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000719
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0004846 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0003094 srlE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0003079 srlE CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0003485 srlE CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002964 srlE CDS
Ortholog
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0003893 CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003526 srlE CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0004254 srlE CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0004963 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0297629 srlE CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003290 srlE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008285 srlE CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002692 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008461 srlE CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002697 srlE CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001592 CDS
Person Approved Go view Escherichia coli ATCC 8739 AEM-0006519 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007402 srlE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007352 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079413 srlE CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0003085 srlE CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003593 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008181 srlE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008804 srlE CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007424 srlE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001268 CDS
Person Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010927 srlE pseudogene
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0285376 srlE pseudogene
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006346 srlE CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007514 srlE CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0003218 srlE CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0002532 srlE CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002772 srlE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003267 srlE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0003183 srlE CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0003157 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0003017 srlE CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0177264 srlE CDS
Person Approved Go view Escherichia coli SE11 AFS-0003008 CDS
Person Approved Go view Escherichia coli SMS-3-5 AFT-0002824 srlE CDS
Person Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0285297 srlE pseudogene
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000850 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0003074 srlE CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0003047 srlE CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004062 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000878 srlE CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003435 CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0007767 srlE1 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007120 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000142 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003239 srlE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007398 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0008736 srlE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008287 srlE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006570 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007379 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008824 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005377 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005394 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006502 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007394 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005665 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002719 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002690 srlE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003538 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007558 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005666 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007056 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005265 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0111341 srlE CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0084451 srlE CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003428 srlE CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0098876 srlE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006466 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006811 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008210 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0002127 CDS
Person Approved Go view Shigella boydii 227 ADV-0003095 srlE CDS
Person Approved Go view Shigella boydii BS512 ADJ-0008586 srlE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005558 srlE CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0003317 srlE pseudogene
Person Approved Go view Shigella flexneri 2457T ABQ-0074081 srlE CDS
Person Approved Go view Shigella flexneri 301 ABT-0256085 srlE CDS
Person Uncurated Go view Shigella flexneri 8401 BAG-0002993 srlE pseudogene
Person Approved Go view Shigella sonnei 046 ADD-0003116 srlE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000770 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003274 gutE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001516 gutE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002541 gutE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002779 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB20888mutantTn5 InsertionRequest the StrainABE-0008892srlEsrlE::Tn5KAN-I-SceI at position 722 in Plus orientation ,- pKD465Blattner Laboratory
FB20889mutantTn5 InsertionRequest the StrainABE-0008892srlEsrlE::Tn5KAN-I-SceI at position 722 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2821392 to 2832351
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0008869alaSCDScomplement28193812822011Upstream
ABE-0008872recXCDScomplement28221392822639Upstream
ABE-0008876recACDScomplement28227082823769Upstream
ABE-0008882pncCCDScomplement28238492824346Upstream
ABE-0008885mltBCDScomplement28244912825576Upstream
ABE-0008890srlACDSforward28258322826395Overlaps Upstream
ABE-0008892srlECDSforward28263922827351Matches
ABE-0008894srlBCDSforward28273622827733Downstream
ABE-0008896srlDCDSforward28277372828516Downstream
ABE-0285538repeat_regionforward28285612828589Downstream
ABE-0008898gutMCDSforward28286212828980Downstream
ABE-0008900srlRCDSforward28290472829820Downstream
ABE-0008902gutQCDSforward28298132830778Downstream
ABE-0008904norRCDScomplement28307752832289Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.