Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0009238 (amiC) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0009238 showshow history
Names
amiC ygdN JW5449 ECK2813 b2817
Product
N-acetylmuramoyl-L-alanine amidase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2947757 2949010 1254 418
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001033
EnteroFam0009238: Trusted threshold=1071.2; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR002508 (IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain) Apr 2008
Automated Process Approved IPR006311 (IPR006311 Twin-arginine translocation pathway, signal sequence) Apr 2008
Automated Process Approved IPR021731 (IPR021731 AMIN domain) Jul 2018
Automated Process Approved PF01520 (PF01520 N-acetylmuramoyl-L-alanine amidase) Jul 2018
Automated Process Approved PF11741 (PF11741 AMIN domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0009252 peptidoglycan biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0009253 peptidoglycan catabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002508
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0008745 N-acetylmuramoyl-L-alanine amidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002508
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name amiC Experimental - PubMed ID: 11454209
Reference: Escherichia coli 		Aug 2002
Person Approved synonym ECK2813 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW5449 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym ygdN Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved locus tag b2817 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product N-acetylmuramoyl-L-alanine amidase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name N-acetylmuramoyl-L-alanine amidase Experimental - PubMed ID: 11454209
Reference: Escherichia coli 		Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0009238: Trusted threshold=1071.2; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001033
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR002508
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR021731 AMIN domain Protein Sequence Similarity - InterPro Domain: IPR021731
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF11741 AMIN domain Protein Sequence Similarity - PFAM Model Name: PF11741
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01520 N-acetylmuramoyl-L-alanine amidase Protein Sequence Similarity - PFAM Model Name: PF01520
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006311 Twin-arginine translocation pathway, signal sequence Protein Sequence Similarity - InterPro Domain: IPR006311
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 3.5.1.28 Published Annotation - Swiss-Prot Accession Number: P63883 Feb 2006
Person Uncurated MultiFun 1.6.7 (metabolism; macromolecules (cellular constituent) biosynthesis; peptidoglycan (murein)) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.2 (cell structure; peptidoglycan (murein)) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13086 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P63883 Published Annotation - Swiss-Prot Accession Number: P63883 Jan 2006
Automated Process Approved db xref GI:87082163 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P63883 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:947293 Published Annotation - Entrez Gene Database ID: 947293
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0009238 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function putative enzyme; Not classified Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC75856.2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0009253 peptidoglycan catabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002508
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009252 peptidoglycan biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0008745 N-acetylmuramoyl-L-alanine amidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002508
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001033 amiC CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000877 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001938 amiC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001650 amiC CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001574 amiC CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001346 amiC CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000662 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002714 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003483 amiC CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0000443 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003641 amiC_2 CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0004384 amiC_2 CDS
Automated Process Approved Go view Dickeya chrysanthemi Ech1591 AFK-0008208 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0015921 amiC CDS
Automated Process Approved Go view Dickeya parazeae Ech586 AGC-0000946 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0004861 CDS
Automated Process Approved Go view Erwinia amylovora ATCC 49946 ACW-0304727 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0000835 amiC CDS
Automated Process Approved Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002840 amiC CDS
Automated Process Approved Go view Escherichia albertii TW07627 AFX-0002720 amiC1 CDS
Automated Process Approved Go view Escherichia coli 101-1 (EAEC) BAB-0009235 amiC CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0002858 CDS
Automated Process Approved Go view Escherichia coli 53638 (EIEC) ADP-0008333 amiC CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0002839 amiC CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001442 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006388 CDS
Automated Process Approved Go view Escherichia coli B171 (EPEC) ADN-0005848 amiC CDS
Automated Process Approved Go view Escherichia coli B7A (ETEC) ADK-0009030 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079569 amiC CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0003218 amiC CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0003735 CDS
Automated Process Approved Go view Escherichia coli E110019 (EPEC) ADM-0010169 amiC CDS
Automated Process Approved Go view Escherichia coli E22 (EPEC) ADL-0008914 amiC CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0003284 amiC CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007573 amiC CDS
Automated Process Approved Go view Escherichia coli EC4024 (EHEC) BBI-0004176 CDS
Automated Process Approved Go view Escherichia coli EC4042 (EHEC) BBA-0007420 amiC CDS
Automated Process Approved Go view Escherichia coli EC4045 (EHEC) BBB-0005940 amiC CDS
Automated Process Approved Go view Escherichia coli EC4076 (EHEC) BAZ-0005417 amiC CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0008918 amiC CDS
Automated Process Approved Go view Escherichia coli EC4196 (EHEC) BAX-0010226 amiC CDS
Automated Process Approved Go view Escherichia coli EC4206 (EHEC) BAW-0006718 amiC CDS
Automated Process Approved Go view Escherichia coli EC4401 (EHEC) BAV-0010094 amiC CDS
Automated Process Approved Go view Escherichia coli EC4486 (EHEC) BAU-0006214 amiC CDS
Automated Process Approved Go view Escherichia coli EC4501 (EHEC) BAT-0010191 amiC CDS
Automated Process Approved Go view Escherichia coli EC508 (EHEC) BBJ-0009381 amiC CDS
Automated Process Approved Go view Escherichia coli EC869 (EHEC) BBC-0008390 amiC CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0027806 amiC CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006070 amiC CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007640 amiC CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0002637 amiC CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0002887 amiC CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003471 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0003617 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0003338 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0003134 CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133715 amiC CDS
Automated Process Approved Go view Escherichia coli TW14588 (EHEC) BBK-0000971 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0003227 amiC CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0002956 CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0004150 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0003234 amiC CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001489 CDS
Automated Process Approved Go view Musicola paradisiaca Ech703 AGA-0007938 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002394 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0002615 CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001575 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0003198 amiC CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0000956 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0010859 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0000046 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0291128 amiC CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006248 amic3 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061237 amiC CDS
Automated Process Approved Go view Pectobacterium brasiliensis 1692 AED-0000552 amiC CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0000244 amiC CDS
Person Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001641 CDS
Automated Process Approved Go view Pectobacterium sp. PC1 AFL-0005549 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0138227 amiC CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0005023 CDS
Automated Process Approved Go view Salmonella Arizonae CDC 346-86 BCD-0004901 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0003430 amiC CDS
Automated Process Approved Go view Salmonella Enteritidis P125109 BCF-0009232 amiC CDS
Automated Process Approved Go view Salmonella Gallinarum 287/91 BCG-0008765 amiC CDS
Automated Process Approved Go view Salmonella Paratyphi A AKU_12601 BCH-0002884 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0002855 amiC CDS
Automated Process Approved Go view Salmonella Paratyphi B SPB7 BCC-0003737 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0111707 amiC CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0084617 amiC CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003611 amiC CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0099331 amiC CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0001871 CDS
Person Approved Go view Shigella boydii 227 ADV-0002984 CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008456 amiC CDS
Automated Process Approved Go view Shigella dysenteriae 1012 BAA-0007112 amiC CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0003467 CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0074202 amiC CDS
Person Approved Go view Shigella flexneri 301 ABT-0089081 CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0003089 CDS
Person Approved Go view Shigella sonnei 046 ADD-0003250 amiC CDS
Person Uncurated Go view Wigglesworthia brevipalpis ACB-0135767 b2817 CDS
Person Uncurated Go view Wigglesworthia morsitans AEQ-0000707 amiC pseudogene
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0007237 amiC CDS
Automated Process Approved Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000836 CDS
Automated Process Approved Go view Yersinia enterocolitica 8081 BAH-0009581 CDS
Automated Process Approved Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001781 amiC_3 CDS
Automated Process Approved Go view Yersinia intermedia ATCC 29909 [T] AEH-0001294 amiC CDS
Automated Process Approved Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000539 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241116 amiC CDS
Automated Process Approved Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007349 CDS
Automated Process Approved Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000607 amiC CDS
Automated Process Approved Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002336 CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118632 amiC CDS
Automated Process Approved Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007977 CDS
Automated Process Approved Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007371 CDS
Automated Process Approved Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008648 CDS
Automated Process Approved Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006437 CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032924 amiC CDS
Automated Process Approved Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005632 CDS
Automated Process Approved Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003584 amiC CDS
Automated Process Approved Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002024 CDS
Automated Process Approved Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006089 CDS
Automated Process Approved Go view Yersinia pseudotuberculosis IP31758 ADS-0004941 CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0003128 amiC CDS
Automated Process Approved Go view Yersinia pseudotuberculosis PB1/+ AFV-0003758 CDS
Automated Process Approved Go view Yersinia pseudotuberculosis YPIII AFW-0001221 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0007860 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0002278 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB22486mutantTn5 InsertionRequest the StrainABE-0009238amiCb2817::Tn5KAN-I-SceI at position 1271 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2942757 to 2954010
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0047263gcvBncRNAforward29426962942901Downstream
ABE-0009214ygdICDScomplement29429182943145Downstream
ABE-0009218csdACDSforward29433372944542Downstream
ABE-0009220csdECDSforward29445422944985Downstream
ABE-0285550repeat_regionforward29449942945027Downstream
ABE-0009223tcdACDScomplement29450362945842Downstream
ABE-0285551repeat_regionforward29458962945992Downstream
ABE-0009228mltACDScomplement29460812947178Downstream
ABE-0009232metZtRNAforward29473872947463Downstream
ABE-0009234metWtRNAforward29474972947573Downstream
ABE-0009236metVtRNAforward29476072947683Downstream
ABE-0009238amiCCDScomplement29477572949010Matches
ABE-0009245argACDSforward29492422950573Upstream
ABE-0285552repeat_regionforward29506132950626Upstream
ABE-0009247recDCDScomplement29506352952461Upstream
ABE-0009249recBCDScomplement29524612956003Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.