Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0009888 (yqhD) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0009888 showshow history
Names
yqhD JW2978 ECK3003 b3011
Product
NADP-dependent alcohol dehydrogenase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3155355 3156518 1164 388
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001103
EnteroFam0009888: Trusted threshold=1024; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR001670 (IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase gldA) Apr 2008
Automated Process Approved PF00465 (PF00465 Iron-containing alcohol dehydrogenase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR001670
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0046872 metal ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name yqhD Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym ECK3003 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW2978 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3011 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product NADP-dependent alcohol dehydrogenase Experimental - PubMed ID: 15327949
Reference: Escherichia coli K-12 		Feb 2007
Person Approved alternate product name putative oxidoreductase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Automated Process Approved alternate product name aldehyde reductase, NADPH-dependent Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0009888: Trusted threshold=1024; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001103
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase gldA Protein Sequence Similarity - InterPro Domain: IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00465 Iron-containing alcohol dehydrogenase Protein Sequence Similarity - PFAM Model Name: PF00465
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Automated Process Uncurated EC number 1.-.-.- Published Annotation - Database Name: EC2GO: GO:0016491
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Approved EC number 1.1.-.- Published Annotation - Swiss-Prot Accession Number: Q46856 Feb 2006
Automated Process Approved EC number 1.1.1.- Published Annotation - Swiss-Prot Accession Number: Q46856
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Uncurated MultiFun 1.7.1 (metabolism; central intermediary metabolism; unassigned reversible reactions) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG13014 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:Q46856 Published Annotation - Swiss-Prot Accession Number: Q46856 Jan 2006
Automated Process Approved db xref GeneID:947493 Published Annotation - Entrez Gene Database ID: 947493
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:1789386 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0009888 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved function enzyme; Not classified Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note putative oxidoreductase Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76047.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 9.26
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR001670
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0046872 metal ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001103 yqhD CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0002247 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002039 yqhD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002049 yqhD CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002463 yqhD CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002163 yqhD CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000703 yqhD CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0000243 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000732 yqhD CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0004585 yqhD CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008893 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016533 yqhD CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000349 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0004677 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002525 yqhD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005747 yqhD CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003124 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008109 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003084 yqhD CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0001180 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0006142 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005557 yqhD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007827 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0079916 yqhD CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0003464 yqhD CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0004076 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005644 yqhD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005550 yqhD CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0003515 yqhD CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0007913 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000281 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007662 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006179 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008438 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005662 yqhD CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009158 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006006 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006962 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005943 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006458 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005766 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005349 yqhD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006194 yqhD CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028037 yqhD CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007631 yqhD CDS
Automated Process Approved Go view Escherichia coli HS ADR-0007871 yqhD CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0003524 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0002810 yqhD CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003080 yqhD CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0003645 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0003360 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0003528 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0003460 CDS
Person Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0179606 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0003357 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0003294 yqhD CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0133952 yqhD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005850 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0003440 yqhD CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001105 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0003440 yqhD CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0001737 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008649 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0060568 yqhD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000237 CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000118 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001914 yqhD CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0004850 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007506 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004685 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0003634 yqhD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007765 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009802 yqhD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009268 yqhD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007340 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007772 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006731 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005730 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006194 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006894 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007777 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005295 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003064 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0003031 yqhD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003964 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007931 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007141 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007419 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007340 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0112086 yqhD CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0084803 yqhD CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0003837 yqhD CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0099851 yqhD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006069 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006155 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004707 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0001640 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0268121 CDS
Person Approved Go view Shigella boydii 227 ADV-0003297 yqhD CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0008853 yqhD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003986 yqhD CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0003497 yqhD CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0074442 yqhD CDS
Person Approved Go view Shigella flexneri 301 ABT-0089303 yqhD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003262 yqhD CDS
Person Approved Go view Shigella sonnei 046 ADD-0003445 yqhD CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003592 VCA0702 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000298 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0010474 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001997 yqhD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001888 yqhD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001428 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241484 yqhD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004375 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003729 yqhD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006099 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002648 CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0117557 yqhD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005027 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005168 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002842 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009299 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006336 CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033273 yqhD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004393 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000661 yqhD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000541 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004666 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004530 CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0003496 yqhD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004211 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000780 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0007123 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0002600 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3150355 to 3161518
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0009859yghACDSforward31496623150546Upstream
ABE-0285569repeat_regionforward31505543150808Upstream
ABE-0009866exbDCDScomplement31508183151243Upstream
ABE-0009869exbBCDScomplement31512503151984Upstream
ABE-0009878metCCDSforward31522363153423Upstream
ABE-0009882yghBCDSforward31535633154222Upstream
ABE-0009884yqhCCDScomplement31542623155218Upstream
ABE-0009888yqhDCDSforward31553553156518Matches
ABE-0009892dkgACDSforward31566233157450Downstream
ABE-0009895yqhGCDSforward31576503158576Downstream
ABE-0009898yqhHCDSforward31586273158884Downstream
ABE-0174099ygiQCDScomplement31589273161146Downstream
ABE-0009905ftsPCDScomplement31612573162669Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.