Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0011224 (gntK) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0011224 showshow history
Names
gntK JW3400 ECK3422 b3437
Product
thermoresistant gluconokinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3577065 3577592 528 176
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006001 (IPR006001 Carbohydrate kinase, thermoresistant glucokinase) Apr 2008
Automated Process Approved IPR000623 (IPR000623 Shikimate kinase/Threonine synthase-like 1) Apr 2008
Automated Process Approved IPR031322 (IPR031322 Shikimate kinase/gluconokinase) Jul 2018
Automated Process Approved IPR027417 (IPR027417 P-loop containing nucleoside triphosphate hydrolase) Jul 2018
Automated Process Approved PF01202 (PF01202 Shikimate kinase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006006 glucose metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004765 shikimate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016301 kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name gntK Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK3422 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW3400 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3437 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product thermoresistant gluconokinase Experimental - PubMed ID: 8925917
Reference: Escherichia coli K-12 W3110 		Mar 2008
Automated Process Approved alternate product name gluconate kinase 2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name gluconate kinase 2 in GNT I system, thermoresistant Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name gluconokinase 2, thermoresistant Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR027417 P-loop containing nucleoside triphosphate hydrolase Protein Sequence Similarity - InterPro Domain: IPR027417
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR031322 Shikimate kinase/gluconokinase Protein Sequence Similarity - InterPro Domain: IPR031322
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01202 Shikimate kinase Protein Sequence Similarity - PFAM Model Name: PF01202
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000623 Shikimate kinase/Threonine synthase-like 1 Protein Sequence Similarity - InterPro Domain: IPR000623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006001 Carbohydrate kinase, thermoresistant glucokinase Protein Sequence Similarity - InterPro Domain: IPR006001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 2.7.1.12 Published Annotation - Swiss-Prot Accession Number: P46859 Feb 2006
Person Uncurated MultiFun 1.7.9 (metabolism; central intermediary metabolism; glucose metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0011224 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:947937 Published Annotation - Entrez Gene Database ID: 947937
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:87082265 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P46859 Published Annotation - Swiss-Prot Accession Number: P46859 Jan 2005
Automated Process Approved db xref EcoGene:EG12629 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P46859 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note gluconokinase 2, thermoresistant; gluconate transport, GNT I system; GO_process: GO:0006006 - glucose metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76462.2 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 8.96
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006006 glucose metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0004765 shikimate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000623
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016301 kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006001
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Hypervariable
Person Uncurated Go view Dickeya dadantii 3937 ABF-0015047 gntK CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064484 pseudogene
Person Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003554 CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0004306 gntV CDS
Person Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000127 CDS
Person Uncurated Go view Yersinia enterocolitica 8081 BAH-0011597 CDS
Person Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001148 gntK_1 CDS
Person Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001523 gntK CDS
Person Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000752 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0242250 gntK CDS
Person Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004509 gntK CDS
Person Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003438 gntK CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0128608 gntK CDS
Person Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001486 CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033671 gntK CDS
Person Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004324 gntK CDS
Person Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003970 CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008056 gntK CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003914 gntK CDS
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000089 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001117 gntK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000429 gntK CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002311 gntK CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001836 gntK CDS
Paralog
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013980 idnK CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0004214 gntK CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0004433 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000331 gntK_1 CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0000828 gntK CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0004218 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0306514 gntK CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003702 gntK CDS
Person Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003361 gntK CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001370 aroK CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004887 gntK CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003570 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007657 gntK CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003487 gntK CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000756 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0005645 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006461 gntK CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007556 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080401 gntK CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0003926 gntK CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0004571 gntK CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007215 gntK CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005311 gntK CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0003919 gntK CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008348 gntK CDS
Automated Process Approved Go view Escherichia coli EC4024 (EHEC) BBI-0004706 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008090 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006604 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006150 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005273 gntK CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009587 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005358 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007402 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005183 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005252 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005092 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0004979 gntK CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005581 gntK CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028459 gntK CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0006493 gntK_1 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008324 gntK CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004029 gntK CDS
Person Approved Go view Escherichia coli K-12 DH10B AEC-0003198 gntK CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003935 gntK CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004081 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004078 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0003867 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0003937 gntK CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178083 gntK CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0003776 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0003717 gntK CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134358 gntK CDS
Automated Process Approved Go view Escherichia coli TW14588 (EHEC) BBK-0002634 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0003954 gntK CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0000963 CDS
Person Approved Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0003849 gntK CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002119 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0002865 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0000368 gntK CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0002994 gntK CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0001000 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0003812 gntK CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0000342 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008042 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288480 gntK CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0006748 gntK CDS
Person Approved Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0137907 gntK CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007909 aroK CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004280 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0004056 gntK CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008159 aroK CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011032 gntK CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011929 gntK CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005339 aroK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008209 aroK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005559 aroK CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006243 aroK CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007060 aroK CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007302 aroK CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008164 aroK CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006686 aroK CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003426 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0003392 gntK CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004417 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008330 aroK CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004663 aroK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007800 aroK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004604 aroK CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113985 gntK CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0085705 gntK CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004271 gntK CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0100960 gntK CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005685 aroK CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005109 aroK CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005125 aroK CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0001344 CDS
Person Approved Go view Shigella boydii 227 ADV-0003751 gntK CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0009308 gntK CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003467 gntK CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004064 gntK CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075609 gntK CDS
Person Approved Go view Shigella flexneri 301 ABT-0089693 gntK CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0003659 gntK CDS
Person Approved Go view Shigella sonnei 046 ADD-0004013 gntK CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0005274 gntK CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0004148 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001263 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21206mutantTn5 InsertionRequest the StrainABE-0011224gntKgntK::Tn5KAN-I-SceI at position 205 in Plus orientation ,- pKD465Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3572065 to 3582592
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0011209glgBCDScomplement35713163573502Downstream
ABE-0285815yhgOCDScomplement35736603573701Downstream
ABE-0285823yhgPCDScomplement35736793573708Downstream
ABE-0011211asdCDScomplement35737753574878Downstream
ABE-0011216yhgNCDSforward35750713575664Downstream
ABE-0174105gntUCDScomplement35757213577061Downstream
ABE-0011224gntKCDScomplement35770653577592Matches
ABE-0011226gntRCDScomplement35777313578726Upstream
ABE-0011228yhhWCDScomplement35789503579645Upstream
ABE-0011232yhhXCDScomplement35797683580805Upstream
ABE-0047271ryhBncRNAcomplement35809233581016Upstream
ABE-0285138ryhBprotein_bindcomplement35810193581037Upstream
ABE-0285136ryhB-10_signalcomplement35810233581028Upstream
ABE-0285137ryhBprotein_bindcomplement35810253581043Upstream
ABE-0285135ryhB-35_signalcomplement35810473581052Upstream
ABE-0011240yhhYCDSforward35811383581626Upstream
ABE-0011244yhhZCDSforward35818633583041Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.