Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0011668 (malS) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0011668 showshow history
Names
malS JW3543 ECK3560 b3571
Product
alpha-amylase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3737497 3739527 2031 677
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006589 (IPR006589 (DEPRECATED) Glycosyl hydrolase, family 13, subfamily, catalytic domain) Apr 2008
Automated Process Approved IPR013781 (IPR013781 (DEPRECATED) Glycoside hydrolase, catalytic domain) Apr 2008
Automated Process Approved IPR006047 (IPR006047 Glycosyl hydrolase, family 13, catalytic domain) Apr 2008
Automated Process Approved IPR017853 (IPR017853 Glycoside hydrolase superfamily) Jul 2018
Automated Process Approved PF00128 (PF00128 Alpha amylase, catalytic domain) Jul 2018
Automated Process Uncurated GH13 (GH13 Glycoside Hydrolase Family 13) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0006508 proteolysis Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0000272 polysaccharide catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0043169 cation binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name malS Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW3543 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK3560 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3571 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product alpha-amylase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name alpha-amylase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Uncurated protein family GH13 Glycoside Hydrolase Family 13 Protein Sequence Similarity - CAZy Model Name: GH13
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR017853 Glycoside hydrolase superfamily Protein Sequence Similarity - InterPro Domain: IPR017853
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00128 Alpha amylase, catalytic domain Protein Sequence Similarity - PFAM Model Name: PF00128
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR013781 (DEPRECATED) Glycoside hydrolase, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR013781
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006047 Glycosyl hydrolase, family 13, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR006047
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006589 (DEPRECATED) Glycosyl hydrolase, family 13, subfamily, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 3.2.1.1 Published Annotation - Swiss-Prot Accession Number: P25718 Feb 2006
Person Uncurated MultiFun 1.1.1 (metabolism; carbon utilization; carbon compounds) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.2.4 (metabolism; macromolecule degradation; polysaccharides) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.2 (location of gene products; periplasmic space) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 2.3.6 (information transfer; protein related; turnover, degradation) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11316 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P25718 Published Annotation - Swiss-Prot Accession Number: P25718 Jan 2005
Automated Process Approved db xref GeneID:948088 Published Annotation - Entrez Gene Database ID: 948088
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref UniProtKB/Swiss-Prot:P25718 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1789995 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0011668 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Degradation of polysaccharides Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0000272 - polysaccharide catabolic process; GO_process: GO:0006508 - proteolysis Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76595.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved subcellular localization Periplasmic Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0006508 proteolysis Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0000272 polysaccharide catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0016052 carbohydrate catabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0042597 periplasmic space Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0043169 cation binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006589
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0005444 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002279 malS CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002440 malS CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0003303 malS CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002545 malS CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0004205 malS CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0004216 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000197 malS CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000706 malS CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000462 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004732 malS CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003714 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007500 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003632 malS CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000604 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0005479 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006976 malS CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005281 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080569 malS CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004080 malS CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005061 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006900 malS CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005147 malS CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004067 malS CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008500 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004897 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008278 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006793 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006340 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005085 malS CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009781 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005168 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007593 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005378 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005443 malS CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005285 malS CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005172 malS CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005771 malS CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028641 malS CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005377 malS CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008463 malS CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004288 malS CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003327 malS CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003794 malS CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004219 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004225 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004038 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004103 malS CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178249 malS CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0003919 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0003891 malS CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134527 malS CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002820 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004122 malS CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0003983 malS CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002580 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008045 CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008295 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011463 malS CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005200 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008345 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005694 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006895 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007440 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008297 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006549 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003552 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003514 malS CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004572 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008469 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004523 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007930 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004736 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113681 malS CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0085581 malS CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004426 malS CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101334 malS CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005547 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004973 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005263 CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000919 CDS
Person Approved Go view Shigella boydii 227 ADV-0003906 malS CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0009372 malS CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003157 CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075438 malS CDS
Person Approved Go view Shigella flexneri 301 ABT-0089838 malS CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004220 malS CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003753 VCA0860 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000202 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011994 malS CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002397 malS CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002086 malS CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003558 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243868 malS CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007913 malS CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003597 malS CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007217 malS CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003333 malS CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129067 malS CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005781 malS CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006384 malS CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002990 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006193 malS CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006663 malS CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033897 malS CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006675 malS CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004477 malS CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000018 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004946 malS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008177 malS CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0004029 malS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004907 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000018 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0004669 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0001145 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21298mutantTn5 InsertionRequest the StrainABE-0011668malSmalS::Tn5KAN-I-SceI at position 1816 in Minus orientation ,- pKD465Blattner Laboratory
FB21299mutantTn5 InsertionRequest the StrainABE-0011668malSmalS::Tn5KAN-I-SceI at position 1816 in Minus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3732497 to 3744527
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0011648xylGCDSforward37322013733742Upstream
ABE-0011650xylHCDSforward37337203734901Upstream
ABE-0011652xylRCDSforward37349793736157Upstream
ABE-0285620repeat_regionforward37361543736324Upstream
ABE-0011655baxCDScomplement37363533737177Upstream
ABE-0285772baxLCDScomplement37371773737203Upstream
ABE-0011668malSCDSforward37374973739527Matches
ABE-0011671avtACDSforward37397053740958Downstream
ABE-0285621repeat_regionforward37409643741061Downstream
ABE-0011674ysaACDScomplement37411093741582Downstream
ABE-0011677plaRCDScomplement37416843742532Downstream
ABE-0011682yiaKCDSforward37427333743731Downstream
ABE-0011684yiaLCDSforward37437433744210Downstream
ABE-0011690yiaMCDSforward37443283744801Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.