Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0011941 (gltS) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0011941 showshow history
Names
gltS gltC JW3628 ECK3643 b3653
Product
glutamate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3827460 3828665 1206 402
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004445 (IPR004445 Sodium/glutamate symport carrier protein GltS) Apr 2008
Automated Process Approved PF03616 (PF03616 Sodium/glutamate symporter) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006537 glutamate biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0015813 L-glutamate transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006532 aspartate biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0015501 glutamate:sodium symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name gltS Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW3628 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym gltC Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym ECK3643 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3653 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product glutamate transporter Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name glutamate transport protein (GltS family) Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name glutamate transport Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR004445 Sodium/glutamate symport carrier protein GltS Protein Sequence Similarity - InterPro Domain: IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF03616 Sodium/glutamate symporter Protein Sequence Similarity - PFAM Model Name: PF03616
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 4.2.A.27 (transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Glutamate:Na+ Symporter (GltS) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.5.1.5 (metabolism; building block biosynthesis; amino acids; aspartate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.5.1.1 (metabolism; building block biosynthesis; amino acids; glutamate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.135 (transport; substrate; Na+/glutamate/aspartate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10406 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948166 Published Annotation - Entrez Gene Database ID: 948166
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P0AER8 Published Annotation - Swiss-Prot Accession Number: P0AER8 Jan 2006
Automated Process Approved db xref GI:1790085 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AER8 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0011941 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Amino acids, amines Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note glutamate transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006532 - aspartate biosynthetic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76677.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0006537 glutamate biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO biological process GO:0006532 aspartate biosynthetic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0015813 L-glutamate transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0015501 glutamate:sodium symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004445
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0005448 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002134 gltS CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002290 gltS CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002255 gltS CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002384 gltS CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0004432 gltS CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0004134 gltS CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0000124 gltS CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0000629 gltS CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000387 gltS CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001497 gltS CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004645 gltS CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003790 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007413 gltS CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003704 CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000526 gltS CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0005386 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009907 gltS CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008130 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080655 gltS CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004448 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008951 gltS CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007467 gltS CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004163 gltS CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008588 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005580 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008356 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006871 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006421 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006834 gltS CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009860 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005088 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007673 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005458 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005524 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005389 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006385 gltS CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005851 gltS CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028725 gltS CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005299 gltS CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008551 gltS CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004211 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003405 gltS CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003711 gltS CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004381 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004409 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004212 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004187 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178336 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004008 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0003985 gltS CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134603 gltS CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002929 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004207 CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0003715 gltS CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0000808 gltS CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004060 gltS CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002511 gltS CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0137337 gltS CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008130 gltS CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004080 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004285 gltS CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008378 gltS CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011739 gltS CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011247 gltS CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005117 gltS CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008430 gltS CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005779 gltS CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006025 gltS CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007610 gltS CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007527 gltS CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008381 gltS CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006463 gltS CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003633 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003596 gltS CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004665 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008552 gltS CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004439 gltS CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008021 gltS CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004828 gltS CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113486 gltS CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0085499 gltS CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004517 gltS CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0101574 gltS CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005460 gltS CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004887 gltS CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006544 gltS CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0001004 gltS CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0266533 gltS CDS
Person Approved Go view Shigella boydii 227 ADV-0004063 gltS CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0009522 gltS CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003232 gltS CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004601 gltS CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075350 gltS CDS
Person Approved Go view Shigella flexneri 301 ABT-0089915 gltS CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004121 gltS CDS
Person Approved Go view Shigella sonnei 046 ADD-0004091 gltS CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002930 VCA0041 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0008104 gltS CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003612 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000138 gltC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003725 gltC_3 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003425 gltS CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001772 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234323 gltS CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004144 gltS CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004182 gltS CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007811 gltS CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003253 gltS CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115446 gltS CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007945 gltS CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006286 gltS CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002654 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005509 gltS CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007943 gltS CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029692 gltS CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005104 gltS CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004582 gltS CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004647 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008400 gltS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0003963 gltS CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000039 gltS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000036 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004960 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0005533 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000725 gltS CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21372mutantTn5 InsertionRequest the StrainABE-0011941gltSgltS::Tn5KAN-I-SceI at position 568 in Plus orientation ,+ pKD460Blattner Laboratory
FB21373mutantTn5 InsertionRequest the StrainABE-0011941gltSgltS::Tn5KAN-I-SceI at position 568 in Plus orientation ,- pKD465Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3822460 to 3833665
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0011935spoTCDSforward38224003824508Downstream
ABE-0011937trmHCDSforward38245153825204Downstream
ABE-0011939recGCDSforward38252103827291Downstream
ABE-0285628repeat_regionforward38273383827416Downstream
ABE-0011941gltSCDScomplement38274603828665Matches
ABE-0011946xanPCDSforward38289453830336Upstream
ABE-0011949yicHCDSforward38304573832166Upstream
ABE-0285629repeat_regionforward38321783832204Upstream
ABE-0011951yicICDScomplement38322193834537Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.