Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0012179 (pstB) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0012179 showshow history
Names
pstB JW3703 ECK3718 phoT b3725
Product
ATP-binding component of an ABC superfamily phosphate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3907593 3908366 774 258
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001400
EnteroFam0012179: Trusted threshold=784.9; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Apr 2008
Automated Process Approved IPR005670 (IPR005670 Phosphate transport system permease protein 1) Apr 2008
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Apr 2008
Automated Process Approved IPR027417 (IPR027417 P-loop containing nucleoside triphosphate hydrolase) Jul 2018
Automated Process Approved PF00005 (PF00005 ABC transporter) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0035435 phosphate ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005670
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name pstB Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym ECK3718 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym phoT Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW3703 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3725 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product ATP-binding component of an ABC superfamily phosphate transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Uncurated alternate product name high-affinity phosphate transport protein (ABC superfamily, atp_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name ATP-binding component of high-affinity phosphate-specific transport system Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Automated Process Approved alternate product name phosphate transporter subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0012179: Trusted threshold=784.9; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001400
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR027417 P-loop containing nucleoside triphosphate hydrolase Protein Sequence Similarity - InterPro Domain: IPR027417
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00005 ABC transporter Protein Sequence Similarity - PFAM Model Name: PF00005
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR005670 Phosphate transport system permease protein 1 Protein Sequence Similarity - InterPro Domain: IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated EC number 7.3.2.1 Published Annotation - Swiss-Prot Accession Number: P0AAH0
Reference: Escherichia coli K-12 		Dec 2019
Automated Process Uncurated EC number 3.6.1.3 Published Annotation - Database Name: EC2GO: GO:0016887
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 4.S.155 (transport; substrate; phosphate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.8.1 (metabolism; metabolism of other compounds; phosphorous metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.1.a (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10783 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0AAH0 Published Annotation - Swiss-Prot Accession Number: P0AAH0 Jan 2006
Automated Process Approved db xref ASAP:ABE-0012179 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1790162 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AAH0 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948240 Published Annotation - Entrez Gene Database ID: 948240
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved function transport; Transport of small molecules: Anions Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Uncurated molecular interaction Interacts with the product of mreB ASAP:10661:(interacting residues not known); by MALDI-TOF Experimental - PubMed ID: 15690043
Reference: Escherichia coli K-12 W3110 		Mar 2005
Person Uncurated molecular interaction Interacts with the product of groL ASAP:13568:(interacting residues not known); by MALDI-TOF and LC-MS Experimental - PubMed ID: 15690043
Reference: Escherichia coli K-12 W3110 		Mar 2005
Automated Process Approved note ATP-binding component of high-affinity phosphate-specific transport system; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006793 - phosphorus metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76748.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 7.88
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0035435 phosphate ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005670
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005670
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001400 pstB CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000504 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001329 pstB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001079 pstB CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000873 pstB CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000121 pstB CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000508 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0000869 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0004368 pstB CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0004187 pstB CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004553 pstB CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000537 pstB CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0009444 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016275 pstB CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0004284 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000268 pstB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0307131 pstB CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003922 pstB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003571 pstB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001610 pstB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004543 pstB CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003963 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007328 pstB CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003778 pstB CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000450 pstB CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010508 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007650 pstB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005873 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080834 pstB CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004137 pstB CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0004890 pstB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007638 pstB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007543 pstB CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004286 pstB CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008667 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005709 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008483 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006998 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006546 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006708 pstB CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009988 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0004961 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007801 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005586 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005653 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005518 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006513 pstB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006868 pstB CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028855 pstB CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005201 pstB CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008626 pstB CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004133 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003470 pstB CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003630 pstB CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004299 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004327 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004131 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004288 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178416 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004083 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004086 pstB CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134739 pstB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003060 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004286 pstB CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0003666 pstB CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0000757 pstB CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004178 pstB CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002433 pstB CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0009154 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0003139 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003328 pstB CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003275 pstB CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0000717 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000036 pstB CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0000056 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0011717 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003478 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0287086 pstB CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0007028 pstb3 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0064811 pstB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002953 CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0004363 pstB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001399 pstB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0009605 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0137261 pstB CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0003317 pstB-1 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008246 pstB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003979 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0004407 pstB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008487 pstB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012088 pstB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010931 pstB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005008 pstB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008543 pstB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005893 pstB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005909 pstB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008674 pstB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007635 pstB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008490 pstB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006357 pstB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003733 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0003694 pstB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004813 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008663 pstB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004325 pstB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008131 pstB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008948 pstB CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113279 pstB CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0085395 pstB CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004655 pstB CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0101894 pstB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005308 pstB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009338 pstB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0009358 pstB CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000949 pstB CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0265291 pstB-1 CDS
Person Approved Go view Shigella boydii 227 ADV-0003989 pstB CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0009619 pstB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003316 pstB CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004539 pstB CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075309 pstB CDS
Person Approved Go view Shigella flexneri 301 ABT-0089952 pstB CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004017 pstB CDS
Person Approved Go view Shigella sonnei 046 ADD-0004259 pstB CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0004172 pstB CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0000790 VC0726 CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0007944 pstB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001589 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0012106 phoT CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002434 pstB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002259 pstB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001916 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243952 pstB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008321 pstB1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004959 pstB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007184 pstB1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003303 pstB CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129183 pstB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005747 pstB1 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006349 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003888 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009415 pstB1 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006629 pstB1 CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033929 pstB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008914 pstB1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004756 pstB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004710 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007901 pstB1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008207 pstB1 CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0004080 pstB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004982 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0005019 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0005332 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000993 pstB CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21418mutantTn5 InsertionRequest the StrainABE-0012179pstBpstB::Tn5KAN-I-SceI at position 405 in Minus orientation ,+ pKD460Blattner Laboratory
FB21419mutantTn5 InsertionRequest the StrainABE-0012179pstBpstB::Tn5KAN-I-SceI at position 405 in Minus orientation ,- pKD465Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3902593 to 3913366
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0012169bglBCDScomplement39022893903701Downstream
ABE-0012171bglFCDScomplement39037203905597Downstream
ABE-0012174bglGCDScomplement39057313906567Downstream
ABE-0012177phoUCDScomplement39068533907578Downstream
ABE-0012179pstBCDScomplement39075933908366Matches
ABE-0285635repeat_regionforward39083873908450Upstream
ABE-0012184pstACDScomplement39085493909439Upstream
ABE-0012186pstCCDScomplement39094393910398Upstream
ABE-0285636repeat_regionforward39104433910477Upstream
ABE-0012190pstSCDScomplement39104853911525Upstream
ABE-0012198glmSCDScomplement39118393913668Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.