Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0012184 (pstA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0012184 showshow history
Names
pstA ECK3719 JW3704 R2pho phoT phoR2b b3726
Product
membrane component of an ABC superfamily phosphate transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3908549 3909439 891 297
Sequence

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001401
EnteroFam0012184: Trusted threshold=829.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR005672 (IPR005672 Phosphate transport system permease protein PstA) Apr 2008
Automated Process Approved IPR000515 (IPR000515 ABC transporter type 1, transmembrane domain MetI-like) Apr 2008
Automated Process Approved IPR035906 (IPR035906 MetI-like superfamily) Jul 2018
Automated Process Approved PF00528 (PF00528 Binding-protein-dependent transport system inner membrane component) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0035435 phosphate ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005672
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005887 integral component of plasma membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005672
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0009276 Gram-negative-bacterium-type cell wall GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name pstA Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym phoR2b Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW3704 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym phoT Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym R2pho Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym ECK3719 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3726 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product membrane component of an ABC superfamily phosphate transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Oct 2021
Person Approved alternate product name high-affinity phosphate-specific transport system Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name high-affinity phosphate transport protein (ABC superfamily, membrane) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name phosphate transporter subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Person Approved EnteroFam EnteroFam0012184: Trusted threshold=829.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001401
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR035906 MetI-like superfamily Protein Sequence Similarity - InterPro Domain: IPR035906
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00528 Binding-protein-dependent transport system inner membrane component Protein Sequence Similarity - PFAM Model Name: PF00528
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR000515 ABC transporter type 1, transmembrane domain MetI-like Protein Sequence Similarity - InterPro Domain: IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR005672 Phosphate transport system permease protein PstA Protein Sequence Similarity - InterPro Domain: IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 1.8.1 (metabolism; metabolism of other compounds; phosphorous metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.1.m (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily, membrane component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.155 (transport; substrate; phosphate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10782 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1790163 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0012184 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948239 Published Annotation - Entrez Gene Database ID: 948239
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P07654 Published Annotation - Swiss-Prot Accession Number: P07654 Jan 2005
Automated Process Approved db xref UniProtKB/Swiss-Prot:P07654 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Transport of small molecules: Anions Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note high-affinity phosphate-specific transport system; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006793 - phosphorus metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76749.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR000515
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO biological process GO:0035435 phosphate ion transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005672
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0009276 Gram-negative-bacterium-type cell wall GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005887 integral component of plasma membrane GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR005672
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001401 pstA CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000505 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001147 pstA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001128 pstA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0001257 pstA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000631 pstA CDS
Partial ortholog
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0005799 pstA pseudogene
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0006381 pstA pseudogene
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000509 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0000870 CDS
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0004369 pstA CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0004186 pstA CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004552 pstA CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000536 pstA CDS
Automated Process Approved Go view Dickeya chrysanthemi Ech1591 AFK-0009443 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016276 pstA CDS
Automated Process Approved Go view Dickeya parazeae Ech586 AGC-0004285 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000267 pstA CDS
Automated Process Approved Go view Erwinia amylovora ATCC 49946 ACW-0307135 pstA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003923 pstA CDS
Automated Process Approved Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003572 pstA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001611 pstA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004542 pstA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0003964 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007327 pstA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003779 pstA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000449 pstA CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010507 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007649 pstA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005872 PtsA CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080836 pstA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007639 pstA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007544 pstA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004287 pstA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008668 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005711 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008484 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006999 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006547 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006707 pstA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0009989 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0004960 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007802 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005587 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005654 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005519 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006514 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006869 pstA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028856 pstA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005200 pstA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008627 pstA CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003471 pstA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003629 pstA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004130 CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004084 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004087 pstA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134740 pstA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003062 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004287 pstA CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0003667 pstA CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0000756 pstA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004179 pstA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002432 pstA CDS
Automated Process Approved Go view Musicola paradisiaca Ech703 AGA-0009153 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0003138 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0003327 pstA CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003274 pstA CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0000718 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000035 pstA CDS
Automated Process Approved Go view Pantoea ananatis PA13 APK-0000057 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0011716 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003477 CDS
Automated Process Approved Go view Pantoea stewartii DC283 ACV-0287085 pstA CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0007027 psta3 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0064812 pstA CDS
Automated Process Approved Go view Pectobacterium brasiliensis 1692 AED-0002674 pstA CDS
Automated Process Approved Go view Pectobacterium parmentieri WPP163 AFJ-0001400 pstA CDS
Automated Process Approved Go view Pectobacterium sp. PC1 AFL-0009604 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0137260 pstA CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0003318 pstA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008247 pstA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003978 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0004409 pstA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008488 pstA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012092 pstA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010927 pstA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005007 pstA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008544 pstA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005894 pstA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005908 pstA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008675 pstA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007636 pstA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008491 pstA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006356 pstA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003734 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0003695 pstA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004814 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008664 pstA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004324 pstA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008132 pstA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008949 pstA CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113276 pstA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0085394 pstA CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004656 pstA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0101897 pstA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005307 pstA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009337 pstA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0009359 pstA CDS
Automated Process Uncurated Go view Serratia marcescens subsp. marcescens ATCC 13880 [T] AMF-0000950 pstA CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267938 pstA CDS
Person Uncurated Go view Shigella boydii 227 ADV-0003988 pstA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009618 pstA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003317 pstA CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004538 pstA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075311 pstA CDS
Person Approved Go view Shigella flexneri 301 ABT-0089951 pstA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004016 pstA CDS
Person Approved Go view Shigella sonnei 046 ADD-0004258 pstA CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0004173 pstA CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0007945 pstA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001590 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0012110 phoT CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002435 pstA_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002258 pstA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001917 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243953 pstA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008322 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004960 pstA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007183 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003302 pstA CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129187 pstA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005746 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006348 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003887 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009414 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006628 pstA1 CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033930 pstA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008913 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004757 pstA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004709 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007902 pstA1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008208 pstA1 CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0004081 pstA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004981 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0005018 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0005342 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000992 pstA CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21420mutantTn5 InsertionRequest the StrainABE-0012184pstApstA::Tn5KAN-I-SceI at position 483 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3903549 to 3914439
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0012169bglBCDScomplement39022893903701Downstream
ABE-0012171bglFCDScomplement39037203905597Downstream
ABE-0012174bglGCDScomplement39057313906567Downstream
ABE-0012177phoUCDScomplement39068533907578Downstream
ABE-0012179pstBCDScomplement39075933908366Downstream
ABE-0285635repeat_regionforward39083873908450Downstream
ABE-0012184pstACDScomplement39085493909439Matches
ABE-0012186pstCCDScomplement39094393910398Overlaps Upstream
ABE-0285636repeat_regionforward39104433910477Upstream
ABE-0012190pstSCDScomplement39104853911525Upstream
ABE-0012198glmSCDScomplement39118393913668Upstream
ABE-0012201glmUCDScomplement39138303915200Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.