Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0012577 (hemG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0012577 showshow history
Names
hemG yihB JW3827 ECK3842 b3850
Product
protoporphyrinogen oxidase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4034608 4035153 546 182
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001479
EnteroFam0012577: Trusted threshold=422.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR008254 (IPR008254 Flavodoxin/nitric oxide synthase) Apr 2008
Automated Process Approved IPR001226 (IPR001226 Flavodoxin, conserved site) Apr 2008
Automated Process Approved IPR026816 (IPR026816 Flavodoxin domain) Jul 2018
Automated Process Approved IPR029039 (IPR029039 Flavoprotein-like superfamily) Jul 2018
Automated Process Approved PF12724 (PF12724 Flavodoxin domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name hemG Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym JW3827 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym yihB Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym ECK3842 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3850 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product protoporphyrinogen oxidase Published Annotation - EcoCyc Accession Number: EG11485
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Uncurated alternate product name protoporphyrin flavoprotein oxidase Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name protoporphyrin oxidase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Approved alternate product name protoporphyrin oxidase, flavoprotein Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0012577: Trusted threshold=422.7; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001479
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family IPR008254 Flavodoxin/nitric oxide synthase Protein Sequence Similarity - InterPro Domain: IPR008254
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF12724 Flavodoxin domain Protein Sequence Similarity - PFAM Model Name: PF12724
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR029039 Flavoprotein-like superfamily Protein Sequence Similarity - InterPro Domain: IPR029039
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR026816 Flavodoxin domain Protein Sequence Similarity - InterPro Domain: IPR026816
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR001226 Flavodoxin, conserved site Protein Sequence Similarity - InterPro Domain: IPR001226
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Approved EC number 1.3.3.4 Published Annotation - Swiss-Prot Accession Number: P0ACB4 Feb 2006
Person Uncurated MultiFun 1.5.3.12 (metabolism; building block biosynthesis; cofactor, small molecule carrier; heme, porphyrine) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0ACB4 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0012577 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1790285 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948331 Published Annotation - Entrez Gene Database ID: 948331
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P0ACB4 Published Annotation - Swiss-Prot Accession Number: P0ACB4 Jan 2006
Automated Process Approved db xref EcoGene:EG11485 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note protoporphyrin oxidase Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC76853.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001479 hemG CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000835 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001922 hemG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001615 hemG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000139 hemG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0001395 hemG CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000176 hemG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003973 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004429 hemG CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000422 hemG CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0009064 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0017750 hemG CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0004046 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000060 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0296700 hemG CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0000296 hemG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000276 hemG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007836 hemG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004105 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007197 hemG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0003915 hemG CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000318 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010375 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008890 hemG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006268 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0080993 hemG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004266 hemG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0004798 hemG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006315 hemG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009565 hemG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004426 hemG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0008802 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008619 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007132 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007323 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008445 hemG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010122 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008202 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007934 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005721 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007561 hemG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007003 hemG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0028992 hemG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009134 hemG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008759 hemG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004400 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003570 hemG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003504 hemG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004450 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004537 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004279 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004445 hemG CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178569 hemG CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004218 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004227 hemG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134868 hemG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004826 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004444 hemG CDS
Automated Process Uncurated Go view Ewingella americana ATCC 33852 [T] AMA-0003916 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004392 hemG CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002210 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008830 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0003317 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0000112 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003446 hemG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0000533 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000212 hemG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0004174 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0007964 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0003644 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0288678 hemG CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0007204 hemG CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0060413 hemG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000117 hemG CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0000066 hemG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003770 hemG CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0009339 CDS
Person Uncurated Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0146808 hemG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008383 hemG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003851 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0004550 hemG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008616 hemG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012498 hemG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010546 hemG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007568 hemG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008669 hemG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007580 hemG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007770 hemG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008618 hemG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003866 CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0003825 hemG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004963 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008797 hemG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008261 hemG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0112554 hemG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0085033 hemG CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0004799 hemG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0102280 hemG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005178 hemG CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0263561 CDS
Person Approved Go view Shigella boydii 227 ADV-0004208 hemG CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0009737 hemG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004402 hemG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075075 hemG CDS
Person Approved Go view Shigella flexneri 301 ABT-0090142 hemG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0003879 hemG CDS
Person Approved Go view Shigella sonnei 046 ADD-0004380 hemG CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0002868 VC2755 CDS
Person Uncurated Go view Wigglesworthia morsitans AEQ-0000134 hemG CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0006919 hemG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003218 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000857 hemG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002588 hemG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001628 hemG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001949 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0242187 hemG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006030 hemG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004094 hemG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003613 hemG CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0127909 hemG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008684 hemG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006568 hemG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007559 hemG CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030078 hemG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007015 hemG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000260 hemG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004052 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004414 hemG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004222 hemG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0000289 hemG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000341 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004661 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0000160 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000647 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4029608 to 4040153
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0012564fadBCDScomplement40287824030971Upstream
ABE-0012569pepQCDSforward40311614032492Upstream
ABE-0012571yigZCDSforward40324924033106Upstream
ABE-0012574trkHCDSforward40331454034596Upstream
ABE-0012577hemGCDSforward40346084035153Matches
ABE-0012579rrsArRNAforward40355314037072Downstream
ABE-0012581ileTtRNAforward40371414037217Downstream
ABE-0012584alaTtRNAforward40372604037335Downstream
ABE-0012586rrlArRNAforward40375194040423Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.