Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0012710 (fdoG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0012710 showshow history
Names
fdoG JW3865 ECK3887 b3894
Product
formate dehydrogenase O subunit alpha
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4082772 4085822 3051 1017
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006655 (IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site) Apr 2008
Automated Process Approved IPR006963 (IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain) Apr 2008
Automated Process Approved IPR006656 (IPR006656 Molybdopterin oxidoreductase) Apr 2008
Automated Process Approved IPR006657 (IPR006657 Molybdopterin dinucleotide-binding domain) Apr 2008
Automated Process Approved IPR009010 (IPR009010 Aspartate decarboxylase-like domain superfamily) Apr 2008
Automated Process Approved IPR006443 (IPR006443 Formate dehydrogenase-N, alpha subunit) Apr 2008
Automated Process Approved IPR006311 (IPR006311 Twin-arginine translocation pathway, signal sequence) Apr 2008
Automated Process Approved PF04879 (PF04879 Molybdopterin oxidoreductase Fe4S4 domain) Jul 2018
Automated Process Approved PF00384 (PF00384 Molybdopterin oxidoreductase) Jul 2018
Automated Process Approved PF01568 (PF01568 Molydopterin dinucleotide binding domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006963, IPR006656, IPR006657
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0045333 cellular respiration GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006655
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0047111 formate dehydrogenase (cytochrome-c-553) activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0043546 molybdopterin cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657, IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0030151 molybdenum ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006657
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0009053 (DEPRECATED) electron donor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006655
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0008863 formate dehydrogenase (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fdoG Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW3865 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK3887 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b3894 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product formate dehydrogenase O subunit alpha Published Annotation - EcoCyc Accession Number: EG11858
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Approved alternate product name formate dehydrogenase-O, large subunit Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved alternate product name formate dehydrogenase-O, major subunit Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Protein Sequence Similarity - InterPro Domain: IPR006655
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Protein Sequence Similarity - InterPro Domain: IPR006963
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF04879 Molybdopterin oxidoreductase Fe4S4 domain Protein Sequence Similarity - PFAM Model Name: PF04879
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00384 Molybdopterin oxidoreductase Protein Sequence Similarity - PFAM Model Name: PF00384
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF01568 Molydopterin dinucleotide binding domain Protein Sequence Similarity - PFAM Model Name: PF01568
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006311 Twin-arginine translocation pathway, signal sequence Protein Sequence Similarity - InterPro Domain: IPR006311
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006443 Formate dehydrogenase-N, alpha subunit Protein Sequence Similarity - InterPro Domain: IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006656 Molybdopterin oxidoreductase Protein Sequence Similarity - InterPro Domain: IPR006656
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006657 Molybdopterin dinucleotide-binding domain Protein Sequence Similarity - InterPro Domain: IPR006657
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR009010 Aspartate decarboxylase-like domain superfamily Protein Sequence Similarity - InterPro Domain: IPR009010
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated EC number 1.17.2.3 Published Annotation - Database Name: EC2GO: GO:0047111
Reference: Escherichia coli K-12 MG1655 		Dec 2019
Automated Process Uncurated EC number 1.-.-.- Published Annotation - Database Name: EC2GO: GO:0016491
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated EC number 1.17.1.9 Published Annotation - Swiss-Prot Accession Number: P32176
Reference: Escherichia coli K-12 		Dec 2019
Person Uncurated MultiFun 1.3.7 (metabolism; energy metabolism, carbon; anaerobic respiration) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.4.1 (metabolism; energy production/transport; electron donor) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P32176 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:3868720 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11858 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0012710 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948394 Published Annotation - Entrez Gene Database ID: 948394
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P32176 Published Annotation - Swiss-Prot Accession Number: P32176 Jan 2005
Person Approved function enzyme; Energy metabolism, carbon: Anaerobic respiration Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note formate dehydrogenase-O, major subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAD13456.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved subcellular localization Periplasmic Predicted by PSORTb - PSORTb Final_Score: 9.76
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iMC1010 Experimental - PubMed ID: 15129285
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Person Uncurated subsystem component of in silico model iJR904 Experimental - PubMed ID: 12952533
Reference: Escherichia coli K-12 MG1655 		Feb 2009
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Approved transl except (pos:complement(4085235..4085237),aa:Sec) Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055114 (OBSOLETE) oxidation-reduction process GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006963, IPR006656, IPR006657
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0045333 cellular respiration GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006655
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0030151 molybdenum ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006657
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0047111 formate dehydrogenase (cytochrome-c-553) activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Uncurated GO molecular function GO:0043546 molybdopterin cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006657, IPR006443
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008863 formate dehydrogenase (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006443
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006655
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0009053 (DEPRECATED) electron donor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000043 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000042 fdnG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000060 fdnG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002966 fdnG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000028 fdnG CDS
Ortholog
Person Approved Go view Dickeya dadantii 3937 ABF-0017374 fdoG CDS
Person Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004151 CDS
Person Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003951 fdoG CDS
Person Approved Go view Escherichia coli ATCC 11775 [T] AMC-0000280 CDS
Person Approved Go view Escherichia coli ATCC 8739 AEM-0010328 CDS
Person Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006585 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081043 fdoG CDS
Person Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004320 fdoG CDS
Person Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004468 fdoG CDS
Person Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008858 fdoG CDS
Person Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010176 fdoG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029043 fdoG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0008808 fdoG CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0004512 fdoG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0003459 fdoG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004592 CDS
Person Approved Go view Escherichia coli SE11 AFS-0004267 CDS
Person Approved Go view Escherichia coli SMS-3-5 AFT-0004275 fdoG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0134916 fdoG CDS
Person Approved Go view Escherichia coli UTI89 (UPEC) AEA-0005333 fdoG CDS
Person Approved Go view Photorhabdus luminescens subsp. laumondii TTO1 [T] ACD-0147931 fdoG CDS
Person Uncurated Go view Salmonella Agona SL483 BBX-0008437 fdoG CDS
Person Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003804 fdoG CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0005576 fdoG CDS
Person Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008670 fdoG CDS
Person Uncurated Go view Salmonella Enteritidis P125109 BCF-0012633 fdoG CDS
Person Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010302 fdoG CDS
Person Uncurated Go view Salmonella Heidelberg SL476 BBV-0008719 fdoG CDS
Person Uncurated Go view Salmonella Newport SL254 BBQ-0008667 fdoG CDS
Person Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003918 fdoG pseudogene
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004468 fdoG pseudogene
Person Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005020 fdoG CDS
Person Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008315 fdoG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0113087 fdoG CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0085307 fdoG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0102421 fdoG CDS
Person Approved Go view Shigella boydii 227 ADV-0004260 fdoG CDS
Person Approved Go view Shigella boydii BS512 ADJ-0009790 fdoG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004348 fdoG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075019 fdoG CDS
Person Approved Go view Shigella flexneri 301 ABT-0090188 fdoG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0003826 fdoG CDS
Person Approved Go view Shigella sonnei 046 ADD-0004424 fdoG CDS
Person Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000178 CDS
Person Uncurated Go view Yersinia enterocolitica 8081 BAH-0011925 fdoG CDS
Person Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002374 CDS
Person Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002111 CDS
Person Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003009 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0285063 fdoG CDS
Person Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007893 fdoG CDS
Person Approved Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003625 fdoG CDS
Person Approved Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004458 fdoG pseudogene
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129012 fdoG pseudogene
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033878 fdoG CDS
Person Approved Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004452 fdoG CDS
Person Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000044 fdoG CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008158 fdoG CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0004047 fdoG CDS
Person Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004938 fdoG CDS
Person Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000047 fdoG CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21519mutantTn5 InsertionRequest the StrainABE-0012710fdoGfdoG::Tn5KAN-I-SceI at position 2657 in Plus orientation ,- pKD465Blattner Laboratory
FB21520mutantTn5 InsertionRequest the StrainABE-0012710fdoGfdoG::Tn5KAN-I-SceI at position 2657 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4077772 to 4090822
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0012692fabYCDSforward40774494078438Downstream
ABE-0012696yiiECDSforward40792914079509Downstream
ABE-0012700yiiFCDSforward40797514079969Downstream
ABE-0285650repeat_regionforward40800204080117Downstream
ABE-0012703fdhECDScomplement40802994081228Downstream
ABE-0012705fdoICDScomplement40812254081860Downstream
ABE-0012708fdoHCDScomplement40818574082759Downstream
ABE-0012710fdoGCDScomplement40827724085822Matches
ABE-0012714fdhDCDSforward40860164086849Upstream
ABE-0012718yiiGCDSforward40870024088057Upstream
ABE-0285651repeat_regionforward40880814088101Upstream
ABE-0012720frvRCDScomplement40881074089855Upstream
ABE-0012722frvXCDScomplement40898554090925Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.