Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0013346 (nrfC) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0013346 showshow history
Names
nrfC yjcJ JW4033 ECK4065 b4072
Product
putative menaquinol-cytochrome c reductase 4Fe-4S subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4289808 4290479 672 224
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006311 (IPR006311 Twin-arginine translocation pathway, signal sequence) Apr 2008
Automated Process Approved IPR001450 (IPR001450 (DEPRECATED) 4Fe-4S binding domain) Apr 2008
Automated Process Approved IPR017896 (IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain) Jul 2018
Automated Process Approved IPR019546 (IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal) Jul 2018
Automated Process Approved IPR017567 (IPR017567 Cytochrome c nitrite reductase, Fe-S protein) Jul 2018
Automated Process Approved PF00037 (PF00037 4Fe-4S binding domain) Jul 2018
Automated Process Approved PF13247 (PF13247 4Fe-4S dicluster domain) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0051536 iron-sulfur cluster binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0009054 (DEPRECATED) electron acceptor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nrfC Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym ECK4065 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym JW4033 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym yjcJ Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved locus tag b4072 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product putative menaquinol-cytochrome c reductase 4Fe-4S subunit Published Annotation - EcoCyc Accession Number: EG11946
Reference: Escherichia coli K-12 MG1655 		Oct 2021
Person Approved alternate product name formate-dependent nitrite reductase; Fe-S centers Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name putative nitrite reductase; formate-dependent, Fe-S centers Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name formate-dependent nitrite reductase, 4Fe4S subunit Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Automated Process Approved protein family IPR006311 Twin-arginine translocation pathway, signal sequence Protein Sequence Similarity - InterPro Domain: IPR006311
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Protein Sequence Similarity - InterPro Domain: IPR017896
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Protein Sequence Similarity - InterPro Domain: IPR019546
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR001450 (DEPRECATED) 4Fe-4S binding domain Protein Sequence Similarity - InterPro Domain: IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR017567 Cytochrome c nitrite reductase, Fe-S protein Protein Sequence Similarity - InterPro Domain: IPR017567
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00037 4Fe-4S binding domain Protein Sequence Similarity - PFAM Model Name: PF00037
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF13247 4Fe-4S dicluster domain Protein Sequence Similarity - PFAM Model Name: PF13247
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Uncurated MultiFun 1.3.7 (metabolism; energy metabolism, carbon; anaerobic respiration) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.4.2 (metabolism; energy production/transport; electron acceptor) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0AAK7 Published Annotation - Swiss-Prot Accession Number: P0AAK7 Jan 2006
Automated Process Approved db xref GeneID:948581 Published Annotation - Entrez Gene Database ID: 948581
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref GI:2367345 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0AAK7 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0013346 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG11946 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Energy metabolism, carbon: Anaerobic respiration Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note formate-dependent nitrite reductase; Fe-S centers; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77042.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006118 (OBSOLETE) electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0009061 anaerobic respiration Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO molecular function GO:0051536 iron-sulfur cluster binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0009054 (DEPRECATED) electron acceptor activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001450
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003275 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002731 nrfC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002827 nrfC CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0008453 nrfC CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002673 nrfC CDS
Ortholog
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004141 nrfC_2 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000185 nrfC_1 CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008287 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0016812 nrfC CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000878 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001958 nrfC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006353 nrfC CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004356 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006898 nrfC CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004149 nrfC CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004740 nrfC CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010116 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006281 nrfC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009222 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081276 nrfC CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004738 nrfC CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005340 nrfC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006162 nrfC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006618 nrfC CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004692 nrfC CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009065 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003129 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008905 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007418 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007063 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006261 nrfC CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010407 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007079 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008223 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007193 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005775 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006522 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006011 nrfC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005044 nrfC CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029246 nrfC CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007039 ydhX_2 CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009005 nrfC CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004675 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003765 nrfC CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004159 nrfC CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004782 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004787 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004599 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004720 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178888 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004467 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004526 nrfC CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135166 nrfC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003320 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004671 nrfC CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008143 CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062136 nrfC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001034 nrfC CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000484 nrfC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002113 nrfC CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0007404 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008700 nrfC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003557 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004892 nrfC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008912 nrfC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013404 nrfC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012667 nrfC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007819 nrfC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008977 nrfC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007382 nrfC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004016 nrfC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005758 nrfC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008085 nrfC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008969 nrfC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008274 nrfC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004132 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004091 nrfC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005299 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004320 nrfC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007467 nrfC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008594 nrfC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006283 nrfC CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0114494 nrfC CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0085912 nrfC CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0005151 nrfC CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0103175 nrfC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004866 nrfC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007535 nrfC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005799 nrfC CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0267704 psrB CDS
Person Approved Go view Shigella boydii 227 ADV-0004467 nrfC CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0010012 nrfC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004636 nrfC CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0074810 nrfC CDS
Person Approved Go view Shigella flexneri 301 ABT-0090345 nrfC CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004396 nrfC CDS
Person Approved Go view Shigella sonnei 046 ADD-0004620 nrfC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003310 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004899 ttrB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003581 dmsB_4 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000027 ttrB_2 CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002717 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21643mutantTn5 InsertionRequest the StrainABE-0013346nrfCnrfC::Tn5KAN-I-SceI at position 277 in Plus orientation ,+ pKD460Blattner Laboratory
FB21644mutantTn5 InsertionRequest the StrainABE-0013346nrfCnrfC::Tn5KAN-I-SceI at position 277 in Plus orientation ,- pKD465Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4284808 to 4295479
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0013328actPCDScomplement42832534284902Upstream
ABE-0013330yjcHCDScomplement42848994285213Upstream
ABE-0285673repeat_regionforward42853024285378Upstream
ABE-0013337acsCDScomplement42854134287371Upstream
ABE-0285850ytcBCDSforward42876114287667Upstream
ABE-0013342nrfACDSforward42877644289200Upstream
ABE-0013344nrfBCDSforward42892454289811Overlaps Upstream
ABE-0013346nrfCCDSforward42898084290479Matches
ABE-0013348nrfDCDSforward42904764291432Overlaps Downstream
ABE-0013350nrfECDSforward42915124293170Downstream
ABE-0013352nrfFCDSforward42931634293546Downstream
ABE-0013354nrfGCDSforward42935434294139Downstream
ABE-0013357gltPCDSforward42944814295794Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.