Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0013444 (phnC) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0013444 showshow history
Names
phnC JW4067 ECK4099 b4106
Product
ATP-binding component of an ABC superfamily phosphonate/organophosphate ester transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4324377 4325165 789 263
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012693 (IPR012693 ABC transporter, phosphonate import, PhnC) Apr 2008
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Apr 2008
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Apr 2008
Automated Process Approved IPR027417 (IPR027417 P-loop containing nucleoside triphosphate hydrolase) Jul 2018
Automated Process Approved PF00005 (PF00005 ABC transporter) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0015716 organic phosphonate transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015416 ABC-type phosphonate transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name phnC Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW4067 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK4099 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b4106 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product ATP-binding component of an ABC superfamily phosphonate/organophosphate ester transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2008
Person Approved alternate product name ATP-binding component of phosphonate transport Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name phosphonate transport protein (ABC superfamily, atp_bind) Published Annotation - Database Name: GenProtEC Jan 2006
Automated Process Approved alternate product name phosphonate ABC transporter ATP-binding subunit Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Protein Family
Automated Process Approved protein family IPR012693 ABC transporter, phosphonate import, PhnC Protein Sequence Similarity - InterPro Domain: IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF00005 ABC transporter Protein Sequence Similarity - PFAM Model Name: PF00005
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR027417 P-loop containing nucleoside triphosphate hydrolase Protein Sequence Similarity - InterPro Domain: IPR027417
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated EC number 7.3.2.2 Published Annotation - Swiss-Prot Accession Number: P16677
Reference: Escherichia coli K-12 		Dec 2019
Automated Process Uncurated EC number 3.6.1.3 Published Annotation - Database Name: EC2GO: GO:0016887
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated MultiFun 1.8.1 (metabolism; metabolism of other compounds; phosphorous metabolism) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.3.A.1.a (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases; ABC superfamily ATP binding cytoplasmic component) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.8 (transport; substrate; alkylphosphonate) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.1 (location of gene products; cytoplasm) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG10713 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948623 Published Annotation - Entrez Gene Database ID: 948623
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved db xref UniProtKB:P16677 Published Annotation - Swiss-Prot Accession Number: P16677 Jan 2005
Automated Process Approved db xref GI:1790544 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P16677 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0013444 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function transport; Central intermediary metabolism: Phosphorus compounds Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note ATP-binding component of phosphonate transport; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006793 - phosphorus metabolic process Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77067.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 7.88
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Person Uncurated GO biological process GO:0006793 phosphorus metabolic process Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0015716 organic phosphonate transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0005737 cytoplasm Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0015416 ABC-type phosphonate transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012693
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Homolog
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236478 CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119143 CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032753 CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001291 CDS
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003392 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002553 phnC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002580 phnC CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0002212 phnC CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002840 phnC CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0000393 phnC CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004118 phnC CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0000149 phnC CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0007592 CDS
Person Uncurated Go view Dickeya dadantii 3937 ABF-0020706 CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0002672 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000624 phnC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006391 phnC CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004399 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006862 phnC CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004188 phnC CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004696 phnC CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010071 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006322 phnC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009820 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081317 phnC CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004776 phnC CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005372 phnC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006194 phnC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006656 phnC CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004731 phnC CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009096 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003166 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008945 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007459 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007104 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006220 phnC CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010449 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007120 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008264 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007236 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005815 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006562 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005969 phnC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005084 phnC CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029282 phnC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007084 phnC CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009034 phnC CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004716 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003798 phnC CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004195 phnC CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004752 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004822 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004563 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004761 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178934 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004504 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004563 phnC CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135200 phnC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003358 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004709 phnC CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001312 phnC CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002734 phnC CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0005918 CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005517 CDS
Person Uncurated Go view Pseudomonas syringae pv. tomato DC3000 ADG-0002600 phnC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003531 CDS
Person Approved Go view Shigella boydii 227 ADV-0004495 phnC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004675 phnC CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004631 phnC CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0074828 phnC CDS
Person Approved Go view Shigella flexneri 301 ABT-0090332 phnC CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004380 phnC CDS
Person Approved Go view Shigella sonnei 046 ADD-0004648 phnC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001273 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008306 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002299 ftsE_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002925 ftsE_1 CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002319 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236478 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005454 phnC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001086 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005278 phnC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002187 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119143 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006033 phnC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004756 phnC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001928 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007689 phnC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005308 phnC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032753 CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005460 phnC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003363 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003022 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006509 phnC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006789 phnC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001291 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001548 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003422 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0000812 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000531 phnC CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21668mutantTn5 InsertionRequest the StrainABE-0013444phnCphnC::Tn5KAN-I-SceI at position 579 in Plus orientation ,- pKD465Blattner Laboratory
FB21669mutantTn5 InsertionRequest the StrainABE-0013444phnCphnC::Tn5KAN-I-SceI at position 579 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4319377 to 4330165
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0013426phnJCDScomplement43187614319606Downstream
ABE-0013428phnICDScomplement43195994320663Downstream
ABE-0013430phnHCDScomplement43206634321247Downstream
ABE-0013433phnGCDScomplement43212444321696Downstream
ABE-0013435phnFCDScomplement43216974322422Downstream
ABE-0013437phnE_2CDSpcomplement43224434322811Downstream
ABE-0285115phnEpseudogenecomplement43224434323230Downstream
ABE-0013439phnE_1CDSpcomplement43226614323230Downstream
ABE-0285677repeat_regionforward43232464323332Downstream
ABE-0013442phnDCDScomplement43233364324352Downstream
ABE-0013444phnCCDScomplement43243774325165Matches
ABE-0013447yjdNCDScomplement43252984325741Upstream
ABE-0285678repeat_regionforward43258024326384Upstream
ABE-0013451yjdMCDScomplement43263994326734Upstream
ABE-0013456rdcACDSforward43271354329363Upstream
ABE-0013459rdcBCDSforward43293604330238Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.