Escherichia coli K-12 MG1655
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0013473 (adiC) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0013473 showshow history
Names
adiC aniC yjdD yjdE JW4076 ECK4108 b4115
Product
arginine:agmatine antiporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4335694 4337031 1338 446
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002293 (IPR002293 Amino acid/polyamine transporter I) Apr 2008
Automated Process Approved IPR004841 (IPR004841 Amino acid permease/ SLC12A domain) Apr 2008
Automated Process Approved PF13520 (PF13520 Amino acid permease) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006865 amino acid transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Uncurated GO molecular function GO:0022857 transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Uncurated GO molecular function GO:0015496 putrescine:ornithine antiporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0015171 amino acid transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Uncurated name adiC Published Annotation - PubMed ID: 12867448
Reference: Escherichia coli K-12 		Sep 2021
Person Approved synonym JW4076 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym yjdE Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Automated Process Approved synonym aniC Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved synonym yjdD Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved synonym ECK4108 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b4115 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product arginine:agmatine antiporter Experimental - PubMed ID: 12867448
Reference: Escherichia coli K-12 		Sep 2021
Automated Process Approved alternate product name arginine:agmatine antiporter Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Uncurated alternate product name putative putrescine/ornithine transport protein, cryptic (APC family) Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name putative amino acid/amine transport protein, cryptic Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family PF13520 Amino acid permease Protein Sequence Similarity - PFAM Model Name: PF13520
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004841 Amino acid permease/ SLC12A domain Protein Sequence Similarity - InterPro Domain: IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR002293 Amino acid/polyamine transporter I Protein Sequence Similarity - InterPro Domain: IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.164 (transport; substrate; putrescine/ornithine) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.2.A.3 (transport; Electrochemical potential driven transporters; Porters (Uni-, Sym- and Antiporters); The Amino Acid-Polyamine-Choline (APC) Family) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12462 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:2367353 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P60061 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P60061 Published Annotation - Swiss-Prot Accession Number: P60061 Jan 2006
Automated Process Approved db xref GeneID:948628 Published Annotation - Entrez Gene Database ID: 948628
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0013473 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function putative transport; Not classified Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note putative amino acid/amine transport protein, cryptic; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015496 - putrescine:ornithine antiporter activity Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77076.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006865 amino acid transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Person Uncurated GO molecular function GO:0015496 putrescine:ornithine antiporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0015171 amino acid transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0022857 transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0005453 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002524 adiC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002988 adiC CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0003538 adiC CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002999 adiC CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0001594 adiC CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004109 potE_2 CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0000138 potE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002017 adiC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006401 adiC CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004409 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006851 adiC CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004197 yjdE CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004687 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010061 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005752 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081326 adiC CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004785 CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005381 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006203 adiC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006665 adiC CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004740 adiC CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009106 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003176 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008954 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007468 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007113 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006211 adiC CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010458 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007129 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008273 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007245 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005824 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006571 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005960 adiC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005093 adiC CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029291 adiC CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008522 adiC CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009043 adiC CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0004726 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003807 adiC CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004204 adiC CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004741 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004833 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004552 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004770 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178945 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004513 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004572 adiC CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135209 adiC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003368 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004718 yjdE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008717 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003523 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004913 yjdE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008928 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013464 yjdE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012731 yjdE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007801 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008994 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007400 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004034 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005776 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008103 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008985 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008291 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004147 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004107 yjdE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005319 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004337 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007450 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008611 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006301 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0114532 CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0085928 CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0005172 yjdE CDS
Person Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103218 yjdE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004849 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007518 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005816 CDS
Person Approved Go view Shigella boydii 227 ADV-0004507 yjdE CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0010031 adiC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004685 adiC CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004616 yjdE CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0074838 yjdE CDS
Person Approved Go view Shigella flexneri 301 ABT-0090323 yjdE CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004371 yjdE CDS
Person Approved Go view Shigella sonnei 046 ADD-0004657 adiC CDS
Person Uncurated Go view Xenorhabdus nematophila ATCC 19061 [T] ADW-0003700 aniC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001101 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236400 potE1 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005435 adiC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001109 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005296 adiC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002171 CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119227 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006052 adiC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004738 adiC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001910 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007708 adiC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005290 adiC CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032734 CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005441 adiC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003340 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002998 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006491 adiC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006772 adiC CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001308 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001570 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003400 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0011536 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0004391 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21680mutantTn5 InsertionRequest the StrainABE-0013473adiCyjdE::Tn5KAN-I-SceI at position 1207 in Plus orientation ,+ pKD460Blattner Laboratory
FB21847mutantTn5 InsertionRequest the StrainABE-0013473adiCyjdE::Tn5KAN-I-SceI at position 1207 in Plus orientation ,- pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4330694 to 4342031
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0013462proPCDSforward43305024332004Downstream
ABE-0285679repeat_regionforward43320144332045Downstream
ABE-0285319pmrRCDSforward43321164332205Downstream
ABE-0013464basSCDScomplement43321814333272Downstream
ABE-0013466basRCDScomplement43332824333950Downstream
ABE-0013469eptACDScomplement43339474335590Downstream
ABE-0013473adiCCDScomplement43356944337031Matches
ABE-0013479adiYCDScomplement43371684337929Upstream
ABE-0013483adiACDScomplement43382544340521Upstream
ABE-0013486melRCDScomplement43407204341628Upstream
ABE-0013493melACDSforward43419114343266Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.