Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0013559 (yjeH) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0013559 showshow history
Names
yjeH asoB JW4101 ECK4135 b4141
Product
L-methionine/branched chain amino acid exporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4369156 4370412 1257 419
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Person Approved ADX-0001593
EnteroFam0013559: Trusted threshold=953.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). 		Jan 2006
Automated Process Approved IPR004841 (IPR004841 Amino acid permease/ SLC12A domain) Apr 2008
Automated Process Approved IPR002293 (IPR002293 Amino acid/polyamine transporter I) Apr 2008
Automated Process Approved PF13520 (PF13520 Amino acid permease) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006865 amino acid transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Uncurated GO molecular function GO:0022857 transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0015171 amino acid transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Automated Process Approved name yjeH Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 MG1655 		Sep 2007
Person Approved synonym JW4101 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym asoB Published Annotation - GenBank Accession Number: AL590842
Reference: Yersinia pestis CO92 		Sep 2007
Person Approved synonym ECK4135 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b4141 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product L-methionine/branched chain amino acid exporter Published Annotation - EcoCyc Accession Number: G7833
Reference: Escherichia coli K-12 MG1655 		Jan 2021
Person Approved alternate product name putative transport Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Person Uncurated alternate product name putative transport protein, cytoplasmic membrane protein Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name predicted transporter Published Annotation - PubMed ID: 16397293 Jan 2006
Protein Family
Person Approved EnteroFam EnteroFam0013559: Trusted threshold=953.4; Members of this family are defined by searches with an hmm constructed from an alignment of putative orthologous proteins from eight genomes (E. coli MG1655, E. coli EDL933, S. enterica Typhimurium LT2, S. enterica Typhi CT18, Y. pestis CO92, Y. pseudotuberculosis 32953, E. chrysanthemi 3937 and E. carotovora atroseptica SCRI1043). Protein Sequence Similarity - ASAP FeatureID: ADX-0001593
Reference: EnteroFams 		Jan 2006
Automated Process Approved protein family PF13520 Amino acid permease Protein Sequence Similarity - PFAM Model Name: PF13520
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR004841 Amino acid permease/ SLC12A domain Protein Sequence Similarity - InterPro Domain: IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR002293 Amino acid/polyamine transporter I Protein Sequence Similarity - InterPro Domain: IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Person Uncurated MultiFun 4.9.B (transport; Transporters of Unknown Classification; Putative uncharacterized transport protein) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12470 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0013559 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P39277 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P39277 Published Annotation - Swiss-Prot Accession Number: P39277 Jan 2005
Automated Process Approved db xref GI:1790584 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GeneID:948656 Published Annotation - Entrez Gene Database ID: 948656
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Person Approved function putative transport; Not classified Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note putative transport Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77101.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006865 amino acid transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO biological process GO:0055085 transmembrane transport GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004841
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0022857 transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR002293
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0015171 amino acid transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002293
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Person Approved Go view EnteroFams ADX-0001593 yjeH CDS
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0000900 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002157 yjeH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002357 yjeH CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0003582 yjeH CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002457 yjeH CDS
Ortholog
Automated Process Uncurated Go view Brenneria salicis ATCC 15712 [T] AMK-0000206 CDS
Automated Process Uncurated Go view Brenneria sp. EniD312 AKG-0002846 CDS
Automated Process Uncurated Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0004053 yjeH CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0000983 yjeH CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008309 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0016791 yjeH CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0000862 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000779 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001122 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006429 CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004437 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006820 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004285 yjeH CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004591 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0010014 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008627 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005721 YjeH CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081435 yjeH CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004814 yjeH CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005483 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006231 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009652 CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004765 yjeH CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009133 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003205 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008982 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007496 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007142 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006183 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010487 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007156 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008300 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007275 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005852 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006602 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010059 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005122 CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029318 yjeH CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0008551 yjeH CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009070 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003829 yjeH CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004231 yjeH CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0004861 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004865 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004678 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004802 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0178970 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004541 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004602 CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135235 yjeH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003398 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004748 yjeH CDS
Person Uncurated Go view Hafnia alvei ATCC 13337 [T] AMD-0001355 CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004581 yjeH CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002763 CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0008158 CDS
Person Approved Go view Pectobacterium atrosepticum SCRI1043 ABL-0061132 yjeH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000471 asoB CDS
Person Approved Go view Pectobacterium carotovorum WPP14 ADT-0001427 asoB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000500 yjeH CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0005378 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008766 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003462 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004965 yjeH CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008964 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013561 yjeH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007765 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0009100 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008468 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004073 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005824 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008151 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0009034 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008331 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004180 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004140 yjeH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005482 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004386 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008625 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008660 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006350 CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0114804 yjeH CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0086106 yjeH CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0005211 yjeH CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0103326 yjeH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004810 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008703 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008832 CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0268225 CDS
Person Approved Go view Shigella boydii 227 ADV-0004698 yjeH CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0010089 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007608 CDS
Person Uncurated Go view Shigella dysenteriae 197 ADU-0005027 yjeH CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075898 yjeH CDS
Person Approved Go view Shigella flexneri 301 ABT-0090505 yjeH CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004568 yjeH CDS
Person Approved Go view Shigella sonnei 046 ADD-0004697 yjeH CDS
Person Uncurated Go view Trabulsiella guamensis ATCC 49490 [T] APH-0002168 yjeH CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003740 VCA0847 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000278 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0010532 asoB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001976 asoB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003785 yjeH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001448 CDS
Person Approved Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241445 yjeH CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004396 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003754 yjeH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006075 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002669 asoB CDS
Person Approved Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0117504 yjeH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005048 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005188 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0004146 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009319 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006359 CDS
Person Approved Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033297 yjeH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004370 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000636 yjeH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000513 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004647 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004507 CDS
Person Approved Go view Yersinia pseudotuberculosis IP32953 ACZ-0003516 yjeH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004236 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000754 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4364156 to 4375412
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0013539dsbDCDScomplement43633454365042Downstream
ABE-0013544cutACDScomplement43650184365356Downstream
ABE-0013546dcuACDScomplement43654724366773Downstream
ABE-0285838aspXncRNAcomplement43668394366951Downstream
ABE-0013551aspACDScomplement43668914368327Downstream
ABE-0013557fxsACDSforward43686644369140Downstream
ABE-0013559yjeHCDScomplement43691564370412Matches
ABE-0013566groSCDSforward43706884370981Upstream
ABE-0013568groLCDSforward43710254372671Upstream
ABE-0013572yjeICDSforward43728094373162Upstream
ABE-0285681repeat_regionforward43731974373295Upstream
ABE-0013575yjeJCDScomplement43733654374234Upstream
ABE-0285682repeat_regionforward43744984374596Upstream
ABE-0013580epmBCDScomplement43746294375657Upstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.