Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0013883 (mgtA) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0013883 showshow history
Names
mgtA mgt JW4201 ECK4237 corB b4242
Product
magnesium transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4467625 4470321 2697 899
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006415 (IPR006415 P-type ATPase, subfamily IIIB) Apr 2008
Automated Process Approved IPR000695 (IPR000695 (DEPRECATED) ATPase, P-type, H+ transporting proton pump) Apr 2008
Automated Process Approved IPR001757 (IPR001757 P-type ATPase) Apr 2008
Automated Process Approved IPR004014 (IPR004014 Cation-transporting P-type ATPase, N-terminal) Apr 2008
Automated Process Approved IPR008250 (IPR008250 P-type ATPase, A domain superfamily) Apr 2008
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Apr 2008
Automated Process Approved IPR006068 (IPR006068 Cation-transporting P-type ATPase, C-terminal) Jul 2018
Automated Process Approved IPR036412 (IPR036412 HAD-like superfamily) Jul 2018
Automated Process Approved IPR023298 (IPR023298 P-type ATPase, transmembrane domain superfamily) Jul 2018
Automated Process Approved IPR023299 (IPR023299 P-type ATPase, cytoplasmic domain N) Jul 2018
Automated Process Approved PF00122 (PF00122 E1-E2 ATPase) Jul 2018
Automated Process Approved PF00702 (PF00702 haloacid dehalogenase-like hydrolase) Jul 2018
Automated Process Approved PF00689 (PF00689 Cation transporting ATPase, C-terminus) Jul 2018
Automated Process Approved PF00690 (PF00690 Cation transporter/ATPase, N-terminus) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004014
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0015986 ATP synthesis coupled proton transport Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0015992 (DEPRECATED) proton transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0015693 magnesium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR023299
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0015444 P-type magnesium transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mgtA Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym corB Published Sequence Analysis - PubMed ID: 9729611 Aug 2003
Person Approved synonym JW4201 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK4237 Published Annotation - PubMed ID: 16397293 Jan 2006
Automated Process Approved synonym mgt Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved locus tag b4242 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Approved product magnesium transporter Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name P-type ATPase, Mg2+ ATPase transport protein Published Annotation - Database Name: GenProtEC Jan 2006
Person Approved alternate product name Mg2+ transport ATPase, P-type 1 Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Protein Family
Automated Process Approved protein family IPR000695 (DEPRECATED) ATPase, P-type, H+ transporting proton pump Protein Sequence Similarity - InterPro Domain: IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR001757 P-type ATPase Protein Sequence Similarity - InterPro Domain: IPR001757
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006415 P-type ATPase, subfamily IIIB Protein Sequence Similarity - InterPro Domain: IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR004014 Cation-transporting P-type ATPase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR004014
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR023299 P-type ATPase, cytoplasmic domain N Protein Sequence Similarity - InterPro Domain: IPR023299
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00702 haloacid dehalogenase-like hydrolase Protein Sequence Similarity - PFAM Model Name: PF00702
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00689 Cation transporting ATPase, C-terminus Protein Sequence Similarity - PFAM Model Name: PF00689
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00690 Cation transporter/ATPase, N-terminus Protein Sequence Similarity - PFAM Model Name: PF00690
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR023298 P-type ATPase, transmembrane domain superfamily Protein Sequence Similarity - InterPro Domain: IPR023298
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family PF00122 E1-E2 ATPase Protein Sequence Similarity - PFAM Model Name: PF00122
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR036412 HAD-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036412
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR008250 P-type ATPase, A domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008250
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR006068 Cation-transporting P-type ATPase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR006068
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Other
Person Approved EC number 3.6.3.2 Published Annotation - Swiss-Prot Accession Number: P0ABB8 Feb 2006
Person Uncurated MultiFun 4.3.A.3 (transport; Primary Active Transporters; Pyrophosphate Bond (ATP, GTP, P2) Hydrolysis-driven Active Transporters; The P-type ATPase (P-ATPase) Superfamily) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 6.1 (cell structure; membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 1.3.8 (metabolism; energy metabolism, carbon; ATP proton motive force interconversion) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 4.S.120 (transport; substrate; Mg++) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Person Uncurated MultiFun 7.3 (location of gene products; inner membrane) Published Annotation - MultiFun Database Name: MultiFun Feb 2002
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12525 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0ABB8 Published Annotation - Swiss-Prot Accession Number: P0ABB8 Jan 2006
Automated Process Approved db xref GeneID:948778 Published Annotation - Entrez Gene Database ID: 948778
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref ASAP:ABE-0013883 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0ABB8 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:2367363 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved function enzyme; Transport of small molecules: Cations Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Automated Process Approved note Mg2+ transport ATPase, P-type 1; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; GO_process: GO:0015986 - ATP synthesis coupled proton transport Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77199.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved regulation expression regulated by magnesium; induced mgtA promoter-driven expression after 20 hours is inhibited by magnesium Experimental - PubMed ID: 16269676
Reference: Escherichia coli K-12 MG1655 		Nov 2005
Automated Process Uncurated subcellular localization Cytoplasmic Membrane Predicted by PSORTb - PSORTb Final_Score: 10.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004014
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0015992 (DEPRECATED) proton transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO biological process GO:0015986 ATP synthesis coupled proton transport Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO biological process GO:0015693 magnesium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO cellular component GO:0005886 plasma membrane GO Inferred from Electronic Annotation - PubMed ID: 15501914
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated GO cellular component GO:0019866 organelle inner membrane Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR023299
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000695
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0015444 P-type magnesium transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Person Uncurated GO molecular function GO:0015662 P-type ion transporter activity Ontology Mapping - Source and Dest Ontology: MultiFun to GO Mar 2004
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0001767 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000083 mgtA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000089 mgtA CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0000039 mgtA CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0000131 mgtA CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003827 mgtA CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003949 mgtA_1 CDS
Automated Process Uncurated Go view Citrobacter freundii ATCC 8090 [T] AVI-0001107 mgtA CDS
Automated Process Uncurated Go view Dickeya chrysanthemi Ech1591 AFK-0008096 CDS
Person Approved Go view Dickeya dadantii 3937 ABF-0017561 mgtA CDS
Automated Process Uncurated Go view Dickeya parazeae Ech586 AGC-0001049 CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0000900 mgtA CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0306847 mgtB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003488 mgtB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001015 mgtA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006973 mgtA CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004544 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006711 mgtA CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004388 mgtA CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004485 mgtA CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009884 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006059 mgtA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007514 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081554 mgtA CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0004926 mgtA CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005589 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008328 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007326 mgtA CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004870 mgtA CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009251 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003507 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009087 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007600 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009287 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009168 mgtA CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010594 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006681 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008406 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006763 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005957 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006097 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005570 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005226 mgtA CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029423 mgtA CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0005720 mgtA CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009185 mgtA CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003920 mgtA CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004333 mgtA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0004956 mgtA CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004786 mgtA CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0004919 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0179082 pseudogene
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004652 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004715 mgtA CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135336 mgtA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001262 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0004856 mgtA CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004704 mgtA CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0002874 mgtA CDS
Automated Process Uncurated Go view Musicola paradisiaca Ech703 AGA-0007817 CDS
Person Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060650 mgtB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000303 mgtB CDS
Person Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002445 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002858 mgtB CDS
Automated Process Uncurated Go view Pectobacterium sp. PC1 AFL-0004943 CDS
Person Approved Go view Salmonella Choleraesuis SC-B67 ADB-0005085 mgtA CDS
Person Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0004414 mgtA pseudogene
Person Approved Go view Salmonella Typhi CT18 ABX-0115027 mgtA CDS
Person Approved Go view Salmonella Typhi Ty2 ABS-0086217 mgtA CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0103695 mgtA CDS
Person Approved Go view Shigella boydii 227 ADV-0004581 mgtA CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0010258 mgtA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006566 mgtA CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0004805 mgtA CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0075837 mgtA CDS
Person Approved Go view Shigella flexneri 301 ABT-0090457 mgtA CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004517 mgtA CDS
Person Approved Go view Shigella sonnei 046 ADD-0004800 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006945 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002255 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005011 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001741 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004793 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005693 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002883 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007814 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007595 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008687 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002378 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002147 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008000 mgtA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005600 mgtA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002975 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002046 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Strains to toptop

Strains with mutations in this feature.

Strain NameStrain TypeStrain InformationStrain RequestFeatureIDNameMutation DetailsExperiments Using StrainSubmitter
FB21746mutantTn5 InsertionRequest the StrainABE-0013883mgtAmgtA::Tn5KAN-I-SceI at position 1213 in Plus orientation ,- pKD465Blattner Laboratory
FB21747mutantTn5 InsertionRequest the StrainABE-0013883mgtAmgtA::Tn5KAN-I-SceI at position 1213 in Plus orientation ,+ pKD460Blattner Laboratory
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4462625 to 4475321
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0013865nrdDCDScomplement44605224462660Upstream
ABE-0013870treCCDScomplement44630544464709Upstream
ABE-0013872treBCDScomplement44647594466180Upstream
ABE-0013875treRCDScomplement44662994467246Upstream
ABE-0285267mgtLCDSforward44674314467484Upstream
ABE-0013883mgtACDSforward44676254470321Matches
ABE-0285692repeat_regionforward44703814470468Downstream
ABE-0013886ridACDScomplement44705274470913Downstream
ABE-0013889pyrICDScomplement44709864471447Downstream
ABE-0013892pyrBCDScomplement44714604472395Downstream
ABE-0013899pyrLCDScomplement44723994472533Downstream
ABE-0013905yjgHCDScomplement44728144473209Downstream
ABE-0013909bdcACDScomplement44733404474053Downstream
ABE-0013918bdcRCDSforward44741244474717Downstream
ABE-0013921tabACDSforward44748624475314Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.