Escherichia coli K-12 MG1655
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Working With: Genome: Escherichia coli K-12 MG1655 Version: v3

ABE-0014344 (yjjG) - Escherichia coli K-12 MG1655 - Feature Annotation

ASAP ID
ABE-0014344 showshow history
Names
yjjG JW4336 ECK4365 b4374
Product
pyrimidine 5'-nucleotidase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4608646 4609323 678 226
Sequence

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Context

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Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Apr 2008
Automated Process Approved IPR011951 (IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/PynA) Apr 2008
Automated Process Approved IPR006439 (IPR006439 HAD hydrolase, subfamily IA) Apr 2008
Automated Process Approved IPR006402 (IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3) Apr 2008
Automated Process Approved IPR036412 (IPR036412 HAD-like superfamily) Jul 2018
Automated Process Approved PF13419 (PF13419 Haloacid dehalogenase-like hydrolase) Jul 2018
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006439, IPR011951
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0008967 phosphoglycolate phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name yjjG Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Oct 1998
Person Approved synonym JW4336 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved synonym ECK4365 Published Annotation - PubMed ID: 16397293 Jan 2006
Person Approved locus tag b4374 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu May 2004
Product
Person Uncurated product pyrimidine 5'-nucleotidase Published Annotation - EcoCyc Accession Number: EG12115
Reference: Escherichia coli K-12 MG1655 		Jan 2021
Person Approved alternate product name putative phosphatase Published Annotation - GenBank Accession Number: U00096
Reference: Escherichia coli MG1655 		Jan 2006
Automated Process Approved alternate product name dUMP phosphatase Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved alternate product name predicted hydrolase Published Annotation - PubMed ID: 16397293 Jan 2006
Person Uncurated alternate product name putative enzyme with a phophatase-like domain Published Annotation - Database Name: GenProtEC Jan 2006
Protein Family
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/PynA Protein Sequence Similarity - InterPro Domain: IPR011951
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family PF13419 Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - PFAM Model Name: PF13419
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006439 HAD hydrolase, subfamily IA Protein Sequence Similarity - InterPro Domain: IPR006439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved protein family IPR036412 HAD-like superfamily Protein Sequence Similarity - InterPro Domain: IPR036412
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved protein family IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3 Protein Sequence Similarity - InterPro Domain: IPR006402
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Other
Automated Process Uncurated EC number 3.-.-.- Published Annotation - Database Name: EC2GO: GO:0016787
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Person Approved EC number 3.1.3.5 Published Annotation - Swiss-Prot Accession Number: P0A8Y1 Feb 2006
Automated Process Approved codon start 1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref GI:1790833 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Person Approved db xref UniProtKB:P0A8Y1 Published Annotation - Swiss-Prot Accession Number: P0A8Y1 Jan 2006
Automated Process Approved db xref GeneID:948899 Published Annotation - Entrez Gene Database ID: 948899
Reference: Escherichia coli K-12 MG1655 		Jun 2009
Automated Process Approved db xref UniProtKB/Swiss-Prot:P0A8Y1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref ASAP:ABE-0014344 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved db xref EcoGene:EG12115 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved function enzyme; Degradation of small molecules: Nucleotides Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved note putative phosphatase Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Approved protein id AAC77327.1 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Automated Process Uncurated subcellular localization Unknown Predicted by PSORTb - PSORTb Final_Score: 2.00
Reference: Escherichia coli K-12 MG1655 		Feb 2008
Person Uncurated subsystem component of in silico model iAF1260 Experimental - PubMed ID: 17593909
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated subsystem component of in silico model the E-matrix Experimental - PubMed ID: 19282977
Reference: Escherichia coli K-12 MG1655 		Mar 2009
Automated Process Approved transl table 11 Published Annotation - GenBank Accession Number: U00096.3
Reference: Escherichia coli K-12 MG1655 		Oct 2013
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Automated Process Uncurated GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: InterPro2GO: IPR006439, IPR011951
Reference: Escherichia coli K-12 MG1655 		Jul 2018
Automated Process Approved GO molecular function GO:0008967 phosphoglycolate phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 MG1655 		Apr 2008
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (14 enterobacteria) AMM-0003456 CDS
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001988 yjjG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002199 yjjG CDS
Automated Process Uncurated Go view OrthoMCL (42 Serratia) BEZ-0010102 yjjG CDS
Automated Process Uncurated Go view OrthoMCL (UW draft) CQJ-0002213 yjjG CDS
Ortholog
Automated Process Uncurated Go view Buttiauxella agrestis ATCC 33320 [T] APC-0003756 yjjG CDS
Automated Process Uncurated Go view Cedecea davisae ATCC 33431 [T] ALZ-0003566 CDS
Automated Process Approved Go view Citrobacter amalonaticus ATCC 25405 [T] AUW-0003815 yjjG CDS
Automated Process Approved Go view Citrobacter freundii ATCC 8090 [T] AVI-0001228 yjjG CDS
Automated Process Uncurated Go view Enterobacter cloacae subsp. cloacae ATCC 13047 [T] (AToL DRAFT) AMB-0001019 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC 49946 ACW-0297741 CDS
Automated Process Uncurated Go view Erwinia amylovora ATCC BAA-2158 APN-0003246 yjjG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000649 yjjG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000890 yjjG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008570 yjjG CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0004758 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006612 yjjG CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0004486 yjjG CDS
Automated Process Approved Go view Escherichia coli ATCC 11775 [T] AMC-0004339 CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009787 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007652 CDS
Person Approved Go view Escherichia coli CFT073 (UPEC) ABR-0081673 yjjG CDS
Automated Process Uncurated Go view Escherichia coli DEC7E (UM-IGS draft) CFX-0005060 yjjG CDS
Automated Process Uncurated Go view Escherichia coli DEC9A (UM-IGS draft) CFY-0005790 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009202 yjjG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009510 yjjG CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0004978 yjjG CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0009404 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002898 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009207 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007720 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008224 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009094 yjjG CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0010716 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009226 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008528 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008726 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006081 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008308 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005696 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005356 yjjG CDS
Person Approved Go view Escherichia coli EDL933 (EHEC) ABH-0029546 yjjG CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0009876 yjjG CDS
Automated Process Approved Go view Escherichia coli HS ADR-0009295 yjjG CDS
Automated Process Uncurated Go view Escherichia coli J96 (UPEC) CQK-0005111 CDS
Person Uncurated Go view Escherichia coli K-12 DH10B AEC-0003998 yjjG CDS
Person Approved Go view Escherichia coli K-12 W3110 ADY-0004472 yjjG CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR68 CGA-0005195 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR71 CGB-0000381 CDS
Automated Process Uncurated Go view Escherichia coli MOD1-ECOR8 CFZ-0004913 CDS
Automated Process Uncurated Go view Escherichia coli Nissle 1917 AML-0005097 CDS
Automated Process Uncurated Go view Escherichia coli RS218 (NMEC) ACK-0179320 CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0004756 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0004912 yjjG CDS
Person Approved Go view Escherichia coli Sakai (EHEC) ACA-0135454 yjjG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001385 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0005092 yjjG CDS
Person Uncurated Go view Klebsiella pneumoniae subsp. pneumoniae MGH 78578 AEP-0004880 yjjG CDS
Automated Process Uncurated Go view Leclercia adecarboxylata ATCC 23216 [T] AME-0003018 CDS
Automated Process Uncurated Go view Pantoea agglomerans IG1 APM-0003655 CDS
Automated Process Uncurated Go view Pantoea agglomerans SL1-M5 ALY-0004475 CDS
Automated Process Uncurated Go view Pantoea ananatis AJ13355 AOV-0003852 yjjG CDS
Automated Process Uncurated Go view Pantoea ananatis B1-9 APL-0004291 CDS
Automated Process Uncurated Go view Pantoea ananatis LMG 20103 AKB-0000647 yjjG CDS
Automated Process Uncurated Go view Pantoea ananatis PA13 APK-0003662 CDS
Automated Process Uncurated Go view Pantoea sp. At-9b AGM-0008345 CDS
Automated Process Uncurated Go view Pantoea sp. aB AJV-0004087 CDS
Automated Process Uncurated Go view Pantoea stewartii DC283 ACV-0289191 yjjG CDS
Automated Process Uncurated Go view Pantoea vagans C9-1 ALK-0003800 yjjG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0009038 yjjG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003174 CDS
Person Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0005212 yjjG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0009211 yjjG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0014240 yjjG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0013457 yjjG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006877 yjjG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0009320 yjjG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008143 yjjG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004291 yjjG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004772 yjjG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008383 yjjG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0009260 yjjG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006105 yjjG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004408 CDS
Person Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004368 yjjG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005761 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004634 yjjG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007415 yjjG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008873 yjjG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004199 yjjG CDS
Person Approved Go view Salmonella Typhi CT18 ABX-0115218 CDS
Person Uncurated Go view Salmonella Typhi Ty2 ABS-0086328 CDS
Automated Process Uncurated Go view Salmonella Typhimurium 14028S AJR-0005485 yjjG CDS
Person Approved Go view Salmonella Typhimurium LT2 [T] ABU-0103978 yjjG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004556 yjjG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008274 yjjG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004249 yjjG CDS
Person Uncurated Go view Shewanella oneidensis MR-1 ACY-0263923 CDS
Person Approved Go view Shigella boydii 227 ADV-0004837 yjjG CDS
Automated Process Approved Go view Shigella boydii BS512 ADJ-0010334 yjjG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006928 yjjG CDS
Person Approved Go view Shigella dysenteriae 197 ADU-0005255 yjjG CDS
Person Approved Go view Shigella flexneri 2457T ABQ-0076025 yjjG CDS
Person Approved Go view Shigella flexneri 301 ABT-0090619 yjjG CDS
Automated Process Approved Go view Shigella flexneri 8401 BAG-0004684 yjjG CDS
Person Approved Go view Shigella sonnei 046 ADD-0004919 yjjG CDS
Person Uncurated Go view Vibrio cholerae N16961 ADH-0003498 VCA0608 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003144 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006061 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001003 yjjG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000656 yjjG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000454 CDS
Person Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239272 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006402 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001984 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004785 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001163 CDS
Person Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0122898 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007073 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007505 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002504 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007970 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005940 CDS
Person Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031835 CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008159 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002114 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001011 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007078 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005808 CDS
Person Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002302 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002729 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002303 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 43003 APO-0001906 CDS
Automated Process Uncurated Go view Yokenella regensburgei ATCC 49455 [T] AMG-0000225 CDS
Experimental to toptop
SelectSetNameSetDetailsNotes
stringent responsetranscriptional profile of the stringent responseNone
Recombinant heat-shock dataexpression data for recombinant strain under heat shockThese data are from the Harcum laboratory. (Jeremy Glasner)
Suppressor tRNA expressionexperiment comparing transcript levels in cells with and without suppressor tRNA expressionThese data were reported in the paper: Herring and Blattner. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186(20):6714-20. Link to Abstract (Jeremy Glasner)
Recombinant E. coli expressionexperiment comparing expression of wild-type E. coli with the same strain harboring a plasmid that expresses protein when induced with IPTG These data were reported in the paper: F. T. Haddadin, S. W. Harcum (2005) Transcriptome profiles for high-cell-density recombinant and wild-type Escherichia coli, Biotechnology and Bioengineering, 90:127-153. Link to Abstract (Jeremy Glasner)
Aerobic shiftAerobic shiftThese data were reported in the paper: Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. 2004. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 6;429(6987):92-6. Link to Abstract (Jeremy Glasner)
CalibratorCalibrated microarray experiments (50 hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
AffyData1Affymetrix Experiments (data from 41 chip hybridizations)This data was used in the paper: Allen et al., J. Bacteriol. 185(21):6392-9 (Jeremy Glasner)
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4603646 to 4614323
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
ABE-0000001sourceforward14641652Contains
ABE-0014322yjjQCDSforward46034774604202Upstream
ABE-0014324bglJCDSforward46041604604837Upstream
ABE-0014326fhuFCDScomplement46048754605663Upstream
ABE-0285088yjjZCDSforward46058044606040Upstream
ABE-0014329leuVtRNAcomplement46060794606165Upstream
ABE-0014331leuPtRNAcomplement46062004606286Upstream
ABE-0014333leuQtRNAcomplement46063154606401Upstream
ABE-0285705repeat_regionforward46065584606649Upstream
ABE-0014336rsmCCDScomplement46066694607700Upstream
ABE-0014340holDCDSforward46078034608216Upstream
ABE-0014342rimICDSforward46081854608631Upstream
ABE-0014344yjjGCDSforward46086464609323Matches
ABE-0014346prfCCDSforward46094144611003Downstream
ABE-0014348osmYCDSforward46113964612001Downstream
ABE-0285089ytjACDSforward46121284612289Downstream
ABE-0014351yjjUCDSforward46124114613484Downstream
ABE-0014356yjjVCDSforward46134814614260Downstream
ABE-0285706repeat_regionforward46142574614644Downstream
Release Notes to toptop
All MG1655 annotations and sequence data are publicly available, and investigators can use these data in publications without contacting the genome curators. This version of the sequence was the source of GenBank record U00096.3. Ongoing annotation updates to that GenBank record are being generated from a collaboration that includes ASAP, EcoGene, the Coli Genetic Stock Center, EcoliHub, EcoCyc, RegulonDB and UniProtKB/Swiss-Prot.