Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000096 (ileS) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000096 showshow history
Names
ileS ECDH10B_0027
Product
isoleucyl-tRNA synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 22391 25207 2817 939
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Jul 2009
Automated Process Approved IPR002300 (IPR002300 Aminoacyl-tRNA synthetase, class Ia) Jul 2009
Automated Process Approved IPR013155 (IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding) Jul 2009
Automated Process Approved IPR010663 (IPR010663 Zinc finger, FPG/IleRS-type) Jul 2009
Automated Process Approved IPR015905 (IPR015905 (DEPRECATED) Isoleucyl-tRNA synthetase, class Ia, N-terminal) Jul 2009
Automated Process Approved IPR002301 (IPR002301 Isoleucine-tRNA ligase) Jul 2009
Automated Process Approved IPR001412 (IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site) Jul 2009
Automated Process Approved IPR009080 (IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding) Jul 2009
Automated Process Approved IPR009008 (IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006428 isoleucyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002301
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010663
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ileS Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000094
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0027 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product isoleucyl-tRNA synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Protein Sequence Similarity - InterPro Domain: IPR013155
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002300 Aminoacyl-tRNA synthetase, class Ia Protein Sequence Similarity - InterPro Domain: IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010663 Zinc finger, FPG/IleRS-type Protein Sequence Similarity - InterPro Domain: IPR010663
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015905 (DEPRECATED) Isoleucyl-tRNA synthetase, class Ia, N-terminal Protein Sequence Similarity - InterPro Domain: IPR015905
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Protein Sequence Similarity - InterPro Domain: IPR009008
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Protein Sequence Similarity - InterPro Domain: IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Protein Sequence Similarity - InterPro Domain: IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002301 Isoleucine-tRNA ligase Protein Sequence Similarity - InterPro Domain: IPR002301
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000094 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000094
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006428 isoleucyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002301
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010663
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000272 ileS CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000205 ileS CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016739 ileS CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000752 ileS CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000833 ileS CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009049 ileS CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000025 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006554 ileS CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000021 ileS CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009722 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009369 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076090 ileS CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009669 ileS CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010173 ileS CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000029 ileS CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004477 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002961 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009266 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007778 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008283 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009820 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0004868 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009516 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008588 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008784 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006139 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009612 ileS CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005413 ileS CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0023938 ileS CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009392 ileS CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004709 ileS CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000094 ileS CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000028 ileS CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000025 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000025 ileS CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0129908 ileS CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001447 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000029 ileS CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064193 ileS CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002258 ileS CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000994 ileS CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002250 ileS CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004233 ileS CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003098 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000046 ileS CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004330 ileS CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000152 ileS CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000148 ileS CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006785 ileS CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004418 ileS CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007270 ileS CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004382 ileS CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004865 ileS CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008475 ileS CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004424 ileS CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006010 ileS CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000049 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000048 ileS CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000058 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004727 ileS CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006077 ileS CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004145 ileS CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004288 ileS CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0105378 ileS CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0081759 ileS CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0090773 ileS CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004463 ileS CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007261 ileS CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004343 ileS CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000029 ileS CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005426 ileS CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007375 ileS CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000054 ileS CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0070949 ileS CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086387 ileS CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000022 ileS CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000035 ileS CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000087 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001888 b0026 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000246 ileS CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003240 ileS CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001805 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243205 ileS CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004895 ileS CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004849 ileS CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005896 ileS CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002845 ileS CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0116948 ileS CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005236 ileS CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007630 ileS CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001665 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007194 ileS CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007261 ileS CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033482 ileS CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004647 ileS CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000440 ileS CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003777 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007806 ileS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007475 ileS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000659 ileS CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000764 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004250 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 17391 to 30207
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000090nhaACDSforward1748918655Upstream
AEC-0000091nhaRCDSforward1871519620Upstream
AEC-0004548pseudogenecomplement1965819795Upstream
AEC-0000003IS1A.1repeat_regioncomplement1979620563Upstream
AEC-0000092insB-1CDScomplement1981120314Upstream
AEC-0000093insA-1CDScomplement2023320508Upstream
AEC-0004401rpsTCDScomplement2081521078Upstream
AEC-0000094yaaYCDSforward2118121399Upstream
AEC-0000095ribFCDSforward2140722348Upstream
AEC-0000096ileSCDSforward2239125207Matches
AEC-0000097lspACDSforward2520725701Overlaps Downstream
AEC-0000098fkpBCDSforward2582626275Downstream
AEC-0000099ispHCDSforward2627727227Downstream
AEC-0000100rihCCDSforward2729328207Downstream
AEC-0000101dapBCDSforward2837429195Downstream
AEC-0000102carACDSforward2965130799Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948