Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000156 (aceE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000156 showshow history
Names
aceE ECDH10B_0094
Product
pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 97121 99784 2664 888
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR015941 (IPR015941 (DEPRECATED) Transketolase-like, C-terminal) Jul 2009
Automated Process Approved IPR004660 (IPR004660 Pyruvate dehydrogenase E1 component) Jul 2009
Automated Process Approved IPR005474 (IPR005474 Transketolase, N-terminal) Jul 2009
Automated Process Approved IPR009014 (IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015941
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004660
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015941
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name aceE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000397
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0094 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004660 Pyruvate dehydrogenase E1 component Protein Sequence Similarity - InterPro Domain: IPR004660
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015941 (DEPRECATED) Transketolase-like, C-terminal Protein Sequence Similarity - InterPro Domain: IPR015941
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005474 Transketolase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR005474
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Protein Sequence Similarity - InterPro Domain: IPR009014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000397 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000397
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015941
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015941
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004660
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000292 aceE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000162 aceE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019243 aceE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000854 aceE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000740 aceE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009551 aceE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000122 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006463 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000110 aceE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009628 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006538 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076208 aceE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009947 aceE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006921 aceE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000122 aceE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004566 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001379 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007870 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008553 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0004961 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009389 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007684 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009850 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010420 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009137 aceE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009906 aceE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024030 aceE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009534 aceE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004800 aceE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000397 aceE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000114 aceE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000115 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000125 aceE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0129997 aceE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001543 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000128 aceE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064106 aceE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002181 aceE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002145 aceE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003205 aceE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004354 aceE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002987 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000174 aceE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004443 aceE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000526 aceE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000512 aceE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008367 aceE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004533 aceE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007153 aceE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004501 aceE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004980 aceE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008591 aceE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004538 aceE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005892 aceE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000158 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000157 aceE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000193 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004839 aceE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005959 aceE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004265 aceE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004409 aceE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0105629 aceE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0081869 aceE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091111 aceE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004347 aceE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007141 aceE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004459 aceE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000110 aceE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005505 aceE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005988 aceE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000155 aceE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071045 aceE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086474 aceE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000108 aceE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000130 aceE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001524 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002163 aceE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000170 aceE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002903 aceE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001645 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234798 aceE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005140 aceE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003501 aceE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008215 aceE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003938 aceE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126848 aceE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006376 aceE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005865 aceE CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005852 aceE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004204 aceE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030403 aceE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006607 aceE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000821 aceE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003517 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004914 aceE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007378 aceE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000755 aceE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000877 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004142 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 92121 to 104784
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000151nadCCDScomplement9185692749Upstream
AEC-0000152ampDCDSforward9283793388Upstream
AEC-0000153ampECDSforward9338594239Upstream
AEC-0000154aroPCDScomplement9428295655Upstream
AEC-0000155pdhRCDSforward9619696960Upstream
AEC-0000156aceECDSforward9712199784Matches
AEC-0000157aceFCDSforward99799101691Downstream
AEC-0000158lpdCDSforward102016103440Downstream
AEC-0000159yacHCDScomplement103511105364Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948