Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000157 (aceF) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000157 showshow history
Names
aceF ECDH10B_0095
Product
pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 99799 101691 1893 631
Sequence

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Context

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Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004167 (IPR004167 Peripheral subunit-binding domain) Jul 2009
Automated Process Approved IPR000089 (IPR000089 Biotin/lipoyl attachment) Jul 2009
Automated Process Approved IPR001078 (IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain) Jul 2009
Automated Process Approved IPR006256 (IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex) Jul 2009
Automated Process Approved IPR003016 (IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site) Jul 2009
Automated Process Approved IPR011053 (IPR011053 Single hybrid motif) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006096 glycolytic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0045254 pyruvate dehydrogenase complex GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005515 protein binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name aceF Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000400
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0095 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000089 Biotin/lipoyl attachment Protein Sequence Similarity - InterPro Domain: IPR000089
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004167 Peripheral subunit-binding domain Protein Sequence Similarity - InterPro Domain: IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR001078
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex Protein Sequence Similarity - InterPro Domain: IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011053 Single hybrid motif Protein Sequence Similarity - InterPro Domain: IPR011053
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Protein Sequence Similarity - InterPro Domain: IPR003016
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000400 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000400
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006096 glycolytic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0045254 pyruvate dehydrogenase complex GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005515 protein binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006256
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004167
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000374 aceF CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000408 aceF CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019241 aceF CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000855 aceF CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000739 aceF CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009550 aceF CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000123 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006462 aceF CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000111 aceF CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009627 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007831 aceF CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006537 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009948 aceF CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006920 aceF CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000123 aceF CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004567 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001378 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009364 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007871 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008554 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0004962 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009390 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008688 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009849 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010419 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009138 aceF CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009907 aceF CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024031 aceF CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009535 aceF CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004801 aceF CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000400 aceF CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000115 aceF CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000116 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000126 aceF CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0129998 aceF CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001544 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000129 aceF CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064105 aceF CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003029 aceF CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003428 aceF CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003204 aceF CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004355 aceF CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002985 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000175 aceF CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004444 aceF CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000528 aceF CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000514 aceF CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008366 aceF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004534 aceF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007152 aceF CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004502 aceF CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004981 aceF CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008592 aceF CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004539 aceF CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005891 aceF CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000159 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000158 aceF CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000194 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004840 aceF CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005958 aceF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004266 aceF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004410 aceF CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0105630 aceF CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0081870 aceF CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091114 aceF CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004346 aceF CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007140 aceF CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004460 aceF CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000111 aceF CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005506 aceF CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005989 aceF CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000156 aceF CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071046 aceF CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086475 aceF CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000109 aceF CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000131 aceF CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001523 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002165 aceF CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000169 aceF CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002902 aceF CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001646 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234800 aceF CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005139 aceF CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003500 aceF CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008214 aceF CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003939 aceF CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126842 aceF CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006377 aceF CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005866 aceF CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005853 aceF CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004205 aceF CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030404 aceF CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006608 aceF CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000822 aceF CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003518 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004913 aceF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007377 aceF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000756 aceF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000878 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004141 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 94799 to 106691
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000154aroPCDScomplement9428295655Upstream
AEC-0000155pdhRCDSforward9619696960Upstream
AEC-0000156aceECDSforward9712199784Upstream
AEC-0000157aceFCDSforward99799101691Matches
AEC-0000158lpdCDSforward102016103440Downstream
AEC-0000159yacHCDScomplement103511105364Downstream
AEC-0000160acnBCDSforward105719108316Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948