Escherichia coli K-12 DH10B
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000193 (fhuB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000193 showshow history
Names
fhuB ECDH10B_0133
Product
fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 145566 147548 1983 661
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000522 (IPR000522 ABC transporter, permease protein, BtuC-like) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fhuB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000526
Reference: Escherichia coli K-12 MG1655
Mar 2007
Person Approved locus tag ECDH10B_0133 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B
Feb 2008
Product
Person Approved product fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12
Mar 2007
Protein Family
Automated Process Approved protein family IPR000522 ABC transporter, permease protein, BtuC-like Protein Sequence Similarity - InterPro Domain: IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000526 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000526
Reference: Escherichia coli K-12 MG1655
Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000522
Reference: Escherichia coli K-12 DH10B
Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001440 fhuB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001829 fhuB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0015425 fhuB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000918 fhuB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000698 fhuB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008421 fhuB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000164 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006419 fhuB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000150 fhuB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009574 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007874 fhuB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006491 FhuB CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076252 fhuB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005805 fhuB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006878 fhuB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000165 fhuB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004608 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001337 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009405 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007912 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008595 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009477 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005003 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009563 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008731 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007728 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009808 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009881 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010014 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009529 fhuB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024070 fhuB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007901 fhuB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004839 fhuB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000526 fhuB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000153 fhuB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000155 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000166 fhuB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130036 fhuB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001585 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000170 fhuB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063605 fhuB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001899 fhuB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002039 fhuB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004072 fhuB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004410 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002947 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000217 fhuB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004489 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000681 fhuB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000662 fhuB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008312 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004593 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004553 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005039 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008651 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004585 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005846 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000202 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000201 fhuB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000252 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004884 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005912 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004317 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004461 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0105738 fhuB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0081913 fhuB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091228 fhuB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007094 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004505 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000152 fhuB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005543 fhuB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006033 fhuB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000184 fhuB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071084 fhuB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086507 fhuB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000142 fhuB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000178 fhuB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002224 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002264 fhuB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000138 fhuB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000460 fhuB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000882 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234856 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005102 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003466 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008179 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003966 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126737 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006412 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005900 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003982 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005886 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004239 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030435 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006641 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000856 fhuB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003553 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004880 fhuB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007346 fhuB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000783 fhuB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000911 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004107 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 140566 to 152548
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000190mrcBCDSforward138834141368Upstream
AEC-0004409fhuACDSforward141588143831Upstream
AEC-0000191fhuCCDSforward143882144679Upstream
AEC-0000192fhuDCDSforward144679145569Overlaps Upstream
AEC-0000193fhuBCDSforward145566147548Matches
AEC-0000194hemLCDScomplement147706148986Downstream
AEC-0000195clcACDSforward149211150632Downstream
AEC-0000196yadRCDSforward150714151058Downstream
AEC-0000197yadSCDScomplement151105151728Downstream
AEC-0000198btuFCDScomplement151766152566Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948